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Information for unigene UN78269

FASTA Sequence
Unigene ID: UN78269Length: 369 SSR 
GCTTTATATCTATATTGATGAGAGATTAATTACATCTTTGGGAGACTAGGTTTTTCTGTCATTTCTGAAAATACAATACATAAACG
GGAATGAGTGAAGCTGCATATAAACCTGAGACGTTTCCCTCATCTGGAGATATCTTCTTCTTCTTCTTGATAATCATCACTCTTCT
ATTTCCCATAGGAACCGAGCGTACTCTCCAAGTATAATGCCGTCATTTGGAGAAGCTTCAACGGCCTTCTCGAAATAAAACAAGGC
CTTGTCATGGTCACCTTTAATACTCCAAAACGCTTTCGCATATTTGCATAGCGTTTCTCCATCCCCTGTTTCAAACAGCCTTGAAC
CGTGTTCTCCCGCTGTCTCGGACTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM63952 unknown [Arabidopsis thaliana]2811e-023
AAB80632 Contains similarity to Saccharomyces hypothetical 52.1 KD protein (gb|Z28075). EST gb|T04617 comes from this gene [Arabidopsis thaliana]2801e-023
NP_563709 tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]2801e-023
XP_002892222 hypothetical protein ARALYDRAFT_470433 [Arabidopsis lyrata subsp. lyrata]2721e-022
XP_002315589 predicted protein [Populus trichocarpa]1715e-011

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8LBZ5 Putative uncharacterized protein2816e-024
O23031 T1G11.22 protein2808e-024
Q8VZ31 Putative uncharacterized protein At1g045302808e-024
B9HSU4 Predicted protein1714e-011
A5BDH2 Putative uncharacterized protein1705e-011

Arabidopsis top hits (Blast detail)Scoree value
AT1G04530.1 binding2814e-026
AT4G17940.1 binding1613e-012
AT4G32340.1 EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: binding (TAIR:AT1G80130.1); Has 2680 Blast hits to 1282 proteins in 184 species: Archae - 2; Bacteria - 433; Metazoa - 1247; Fungi - 71; Plants - 657; Viruses - 13; Other Eukaryotes - 257 (source: NCBI BLink).1328e-009
AT5G20190.1 binding1282e-008
AT1G80130.1 binding1094e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members