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Information for unigene UN78293

FASTA Sequence
Unigene ID: UN78293Length: 774 SSR 
CATTAAAAAAAATCATTTTATTCAACAATATAAATCTCAAACAGAGAGAACTCAAGATTCTCATCAACAATTACTGTAAACAATTA
TTACATCAAAATAATACAAAGTGAATGAAGCAATTGTGAGTGTAGTAGTATCATCTGAAATGGCGGTTCCTGATAACGCCAGTGCC
ACCTCCTCTACGTTGCTGCTCACCAAAATGAAGTTTCTGCAATCTAATCTGTTCTCTGAACTTGGCTATGAACTCATCAGCTTTTC
TATCGACTTCATAATGCTCATTGCTTACATTATTGCTCTGGCTTTCCCAAGCAGCAACTTCCTCTTCTTCTTCTTCCTCCTCTAAG
GTTTCTTGAGGTAGCTCAGCCTCGGTCTCGGTCTCTTCCGCAACATCATCATCATCATCTTCAGGCTCTGAATGCTTCTCCTGGTG
TAGTACTATTGCTAGTTCTTGTTGCCATTGTCTTCTATGTTTTGTTCTTCCATGGCTTTCCCCTCTGTCATCAGATGAATCACTAT
GGCTGCGGTCAGATCTTATGGTCCTCACTGACTTTCCTCTATAAGCTCTCCAAGATTGCGGACTGTTTGGTATCACTTCCTTGTTC
TCCTCACCAGGAAGATCATAATCCTCAGAGTCGTCATCATCATCATCCGCAGAGTTTCTTTTGCTGTCTTTCACCACCAAAGTGTC
GCTGCCACCTCGTGAAGAACGCATTGCACGCCTAGGTTGGAACTCTAAAGAGTCGTGGCTCCGCACCTTCTTGACACTCATCTTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191597 uncharacterized protein [Arabidopsis thaliana]3854e-035
XP_002878332 hypothetical protein ARALYDRAFT_907560 [Arabidopsis lyrata subsp. lyrata]3666e-033
CAB96200 hypothetical protein [Capsella rubella]1372e-006
XP_002466864 hypothetical protein SORBIDRAFT_01g015430 [Sorghum bicolor]1372e-006

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9M221 Putative uncharacterized protein T8B10_403852e-035
C5WTC5 Putative uncharacterized protein Sb01g0154301371e-006
Q9LEM1 Putative uncharacterized protein1371e-006

Arabidopsis top hits (Blast detail)Scoree value
AT3G60380.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G16790.1); Has 5716 Blast hits to 3635 proteins in 329 species: Archae - 2; Bacteria - 249; Metazoa - 2628; Fungi - 569; Plants - 209; Viruses - 24; Other Eukaryotes - 2035 (source: NCBI BLink).3904e-038
AT4G16790.1 hydroxyproline-rich glycoprotein family protein1297e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members