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Information for unigene UN78341
| FASTA Sequence |
| Unigene ID: UN78341 | Length: 681 |
SSR | | GGAGATTATTCGGGAGCTCCGGGGAACCATGGTGGCGGCGAGACAGCTACGCACACTCCAATCCCAACCTGATAACAAAATATGCG
TCGACTGCGCTCAGAAGAATCCGCAGTGGGCGTCAGTCTCTTACGGAATCTTCATGTGCTTGGAGTGCTCGGGGAAGCACCGAGGA
CTAGGCGTACACATCTCCTTCGTCAGATCCGTCACCATGGACTCGTGGTCAGAGATCCAGATCAAGAAGATGCAAGCAGGAGGAGG
CAACGACCGGCTCAACAGCTTCCTCGCGCAGTACGGAATCCCCAAGGAGACGGATATCGTCTCCAAGTACAGTTCCAACGCCGCTA
CTGTGTATCGCGACCGGATCAAGGCGTTAGCGGAAGGTAGGGTTTGGAGTGATCCGCCTGTCGTTAAGGAAGCGGTTGGGGTGCAT
AAGAAGAAACCTCCGTTAAGTAACGGAGGTAACAACGGAGGGTGGGAGAGCTGGGGTGACGACCGATCTTCGACGGAGATGAGACG
GAATCAATCGGAGAGTGATTTTAGGGGGTTGGGAGGAGGAGGAGGAGGTGCGCTGGGGAAGTCGAAGTCGTCGGAGGAGATATACA
CGAGGTCGGAGCTTGAGGCTTCGGCTGCGGGGAGGGAGAGTTTCTTCGCGAGGAGAGTGGCGGAGAATGAGTGTAAGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002877936 hypothetical protein ARALYDRAFT_485760 [Arabidopsis lyrata subsp. lyrata] | 859 | 3e-090 |
| AAG17006 ARF GAP-like zinc finger-containing protein ZIGA2 [Arabidopsis thaliana] | 847 | 7e-089 |
| NP_190939 putative ADP-ribosylation factor GTPase-activating protein AGD6 [Arabidopsis thaliana] | 847 | 7e-089 |
| NP_181291 ADP-ribosylation factor GTPase-activating protein AGD7 [Arabidopsis thaliana] | 840 | 5e-088 |
| XP_002881515 hypothetical protein ARALYDRAFT_482750 [Arabidopsis lyrata subsp. lyrata] | 835 | 2e-087 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M354 Probable ADP-ribosylation factor GTPase-activating protein AGD6 | 851 | 1e-090 |
| O80925 ADP-ribosylation factor GTPase-activating protein AGD7 | 840 | 2e-089 |
| Q62848 ADP-ribosylation factor GTPase-activating protein 1 | 342 | 1e-031 |
| Q9EPJ9 ADP-ribosylation factor GTPase-activating protein 1 | 338 | 4e-031 |
| Q8N6T3 ADP-ribosylation factor GTPase-activating protein 1 | 336 | 6e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SP31 Arf gtpase-activating protein, putative | 827 | 1e-086 |
| Q2PER6 Putative Asp1 | 751 | 7e-078 |
| B6TT21 DNA binding protein | 733 | 8e-076 |
| Q10N88 ARF GAP-like zinc finger-containing protein ZIGA2, putative, expressed | 706 | 1e-072 |
| A2XF58 Putative uncharacterized protein | 701 | 4e-072 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G37550.1 AGD7; ARF GTPase activator/ DNA binding / zinc ion binding | 860 | 1e-092 |
| AT2G37550.2 AGD7; ARF GTPase activator/ DNA binding / zinc ion binding | 860 | 1e-092 |
| AT3G53710.1 AGD6; ARF GTPase activator/ DNA binding / zinc ion binding | 851 | 1e-091 |
| AT3G53710.2 AGD6; ARF GTPase activator/ DNA binding / zinc ion binding | 851 | 1e-091 |
| AT4G17890.1 AGD8 (ARF-GAP DOMAIN 8); ARF GTPase activator/ DNA binding / zinc ion binding | 299 | 1e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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