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Information for unigene UN78396
| FASTA Sequence |
| Unigene ID: UN78396 | Length: 730 |
SSR | | GGGCCTCATTTCCTGCCAAAACCACTGAGCTCTCTCTCTCTCTCTCTCTCTCTAAGTGTGAAAAATGTCGTCGTCGACTCATCAGT
TAACTTCTTCCATGATCTCTTCTTCCTCATCCACTTTCTTAGCCCCTTCAAGTTTTAATCTCAGAAGTCGAAATGCTTGTTTACCA
ATGCCAAAACGGGTCAACACTTGCAAATGCGTTGCAACCCCACAAGACAAGATTGAATATAAGACAAATGTGTCACGGAATTCAAA
CGTGTCCAAACTCCAGGCTGGTTACCTCTTCCCGGAGATTGCAAGAAGAAGGTCTGCACATTTGCTGAAGTACCCAGATGCGCAAA
TTATCAGTCTTGGAATAGGTGACACTACTGAGCCAATTCCAGAAGTGATTACTTCCGCAGTGGCAAAGAAAGCTCATGAGTTGTCC
ACAGTAGAGGGGTATAGTGGTTATGGTGCTGAACAAGGTGCAAAGCCACTGAGAGCTGCTCTTGCCAAAACATACTACAGTGGCCT
TGGCATAGGTGAAGATGACATCTTCGTTTCTGATGGTGCCAAATGTGATATCTCACGTCTCCAGGTTATGTTTGGTTCCAATGTTA
CAGTTGCTGTTCAAGATCCTTCATATCCGGCTTATGTGGACTCCAGTGTTATTATGGGTCAGACGGGACAATTTAACACAGACGTA
CAGAAGTATGGAAACATCGAGTACATGAGATGCACTCCGGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567934 LL-diaminopimelate aminotransferase [Arabidopsis thaliana] | 1076 | 2e-115 |
| XP_002867163 hypothetical protein ARALYDRAFT_491312 [Arabidopsis lyrata subsp. lyrata] | 1071 | 9e-115 |
| BAJ33637 unnamed protein product [Thellungiella halophila] | 1064 | 6e-114 |
| CAA20581 putative protein [Arabidopsis thaliana] | 921 | 2e-097 |
| 2Z1Z Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-Malate Ion | 921 | 2e-097 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q93ZN9 LL-diaminopimelate aminotransferase, chloroplastic | 1076 | 1e-116 |
| Q6MDE0 LL-diaminopimelate aminotransferase | 462 | 2e-045 |
| Q0ID68 LL-diaminopimelate aminotransferase | 363 | 5e-034 |
| Q72NJ3 LL-diaminopimelate aminotransferase | 356 | 3e-033 |
| Q8F814 LL-diaminopimelate aminotransferase | 356 | 3e-033 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PAK9 Putative uncharacterized protein | 817 | 2e-085 |
| B9S7T6 Transaminase mtnE, putative | 813 | 5e-085 |
| B9HN51 Predicted protein (Fragment) | 745 | 4e-077 |
| Q10MQ2 Aspartate aminotransferase, putative, expressed | 737 | 3e-076 |
| B8AM24 Putative uncharacterized protein | 733 | 1e-075 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G33680.1 AGD2 (ABERRANT GROWTH AND DEATH 2); L,L-diaminopimelate aminotransferase/ transaminase | 1076 | 1e-117 |
| AT2G13810.1 ALD1 (AGD2-LIKE DEFENSE RESPONSE PROTEIN1); catalytic/ pyridoxal phosphate binding / transaminase/ transferase, transferring nitrogenous groups | 525 | 8e-054 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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