Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN78438

FASTA Sequence
Unigene ID: UN78438Length: 681 SSR 
GGACGAACAAAGGAAGACGACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCGTTTCTTCGCCGGAGCAAAAACCAGACTCACA
ATCCAAAGAAAGCGTCGTTGTAACTCTATCGGCTGATCGATAGCAATCGTATCAGCACTGTTCGATCTGAATTGTCTTTACAAAGA
TGTCGAGATTCAGAGACAGAACAGAGGATTTCAAGGACTCTGTTCGCAAATCCGCCGTCTCTAACGGCTACAACGAGGCTAAAGTG
GCAGCGACAATGGCGTCGTTCATCATACATAAGCCAAAGGAGAGGTCTCCTTTCACCAGGGCTGCTCTCAAAACGCTGGAAAGCAT
TAAGGAGTTGGATCAGTTTATGATGAAGCATCGTAAGGACTACGTTGATATGCACAGGACTACTGAACATGAAAAGGATAGCATTG
AACAAGGAATCACTGCTTTTATTAAAGCTTGCAAAGAACAGATCGATGTTCTCAAAAACAGCATTAGAAATGAAGAAGCGAACTCC
AAAGGATGGCTTGGCCTCGCAGCTGATAACTTCAATGCTGATACTGTAGCACACAAACATGGAGTGGTTTTGATTTTGAGCGAGAA
ACTTCATTCAGTCACTGCACAGTTTGACCAGCTTAGAGCGACTCGTTTCCAGATATTATTAACAGAGCTATGCCGAGAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891655 hypothetical protein ARALYDRAFT_892151 [Arabidopsis lyrata subsp. lyrata]7634e-079
AAM63632 unknown [Arabidopsis thaliana]7383e-076
D96556 hypothetical protein F19C24.5 [imported] - Arabidopsis thaliana7331e-075
NP_564597 syntaxin-81 [Arabidopsis thaliana]7331e-075
XP_002316241 predicted protein [Populus trichocarpa]6802e-069

Swiss-Prot top hits (Blast detail)Scoree value
P59277 Syntaxin-817336e-077

TrEMBL top hits (Blast detail)Scoree value
B9HT21 Predicted protein6801e-069
B9HHK0 Predicted protein6522e-066
B9SAI5 Syntaxin-81, putative6432e-065
C6TGA0 Putative uncharacterized protein6154e-062
B4FLS4 Putative uncharacterized protein5501e-054

Arabidopsis top hits (Blast detail)Scoree value
AT1G51740.1 SYP81 (SYNTAXIN OF PLANTS 81); SNAP receptor/ protein binding7336e-078

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members