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Information for unigene UN78488

FASTA Sequence
Unigene ID: UN78488Length: 659 SSR 
GATACACACACACAAAAAGAGAGAGAGAGATAGAGAGAAACACCATCATCCTTCCCAGATTTCGATTTTATTACTTTCTCGAAAAA
TCCGCCAAAAAAATAAATAAGAAAAATGAATTCAGAGTCGTTAGAAAATCTCCACCGTCCACTGATTGAATCATCTAAATCGTTCA
TCGATTACCGGCTCGAGACTGTCTTAACCGACCGAGAACTGCCGTACTTCCGCCGGATCTACCTGGCCATGATGATAGAGATGAAG
TTCCTCTTCCACCTCGCCGCTCCGGCGATCTTCGTCTACGTCATCAACAACGGAATGTCCATCCTCACTCGTATCTTCGCCGGCCA
CGTAGACAGCTCCCAACTCGCCGCTGCTTCGCTAGGAAACAGTGGTTTCAACATGTTCACCTATGGACTTCTGCTTGGTATGGGAA
GTGCGGTGGAGACGTTATGTGGACAAGCGCACGGAGCTCATCGTTACGACATGCTCGGCGTCTACCTCCAGAGATCAACGGTGGTT
CTCATCATCACATGTCTCCCCATGTCCCTCCTCTTCTTCTTCTCCGAGCCTCTCCTCACTGCACTCGGCGAGCCGGAGCAAGTCGC
GTCGATGGCCTCCGTCTTCGTCTACGGCATGATCCCAGTGATCTTCGCCTACGCGGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34317 unnamed protein product [Thellungiella halophila]8772e-092
NP_564787 MATE efflux family protein [Arabidopsis thaliana]8737e-092
AAK82541 At1g61890/F8K4_9 [Arabidopsis thaliana]8737e-092
XP_002886501 mate efflux family protein [Arabidopsis lyrata subsp. lyrata]8729e-092
XP_002892653 mate efflux family protein [Arabidopsis lyrata subsp. lyrata]7312e-075

Swiss-Prot top hits (Blast detail)Scoree value
Q9LYT3 Protein TRANSPARENT TESTA 122821e-024
Q05497 Uncharacterized transporter YDR338C1762e-012
Q96FL8 Multidrug and toxin extrusion protein 11735e-012
Q5RFD2 Multidrug and toxin extrusion protein 11726e-012
A4IIS8 Multidrug and toxin extrusion protein 11654e-011

TrEMBL top hits (Blast detail)Scoree value
O80695 At1g61890/F8K4_98735e-092
Q94AC7 At1g61890/F8K4_98735e-092
Q8L714 Putative uncharacterized protein At1g116707265e-075
Q9SAB0 F25C20.18 protein7265e-075
B9RXM6 Multidrug resistance pump, putative5392e-053

Arabidopsis top hits (Blast detail)Scoree value
AT1G61890.1 MATE efflux family protein8733e-094
AT1G11670.1 MATE efflux family protein7263e-077
AT4G21903.1 antiporter/ drug transporter5346e-055
AT4G21910.2 MATE efflux family protein5283e-054
AT4G21910.1 MATE efflux family protein5203e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members