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Information for unigene UN78489
| FASTA Sequence |
| Unigene ID: UN78489 | Length: 787 |
SSR | | GGGGGAGCTTGAGGAAGGGCCTATAGCCAGAGCCGCTAAAAGAAAATAAATTAAATTAGGGCTATAAACTTTACCAGGAAGATAAC
TTTTGATGGCGAGGACGGGAACTGGGAAGAACGGTGCGGGGCAATTCTTCCTGGCGACGCTGCTTCTATGGCTAGTCTCCGTCGTG
TTCGAGATTGCCTACACTCAATCATCACCTCCGCCTCAGTGGTTTTCATTCTGCTCAACCAATGCTTAGAGAAAGGTGTAGACGAG
ATGTTCGATCATTCTGAGCTCGTTGGTGGGGCTTGGAACTGGGCACACCCTGCTCTGTGTTTCTCTTGCGGTTACTTTGCTTATGA
CCAGTGGGATATGCTTCGGTACCGTTCATACAGCGGCTTAATACCTTCTATCCTGGTCCACCATCTCTTCCTCCTCGTTTGCTTCA
CTTTGGCTCTGTACCGGAACGTCACCATCAACTACCTCATCCTTACTCTCATTTGCGAGATGCATTCGATCTTTCTGCACGTGAGG
AAGCTAAGGAGGATGGCGGGAATCCGTGACAGCGGCACGGCGTTGGTGAAACTGGAGTGGGTACTAAACTGGACGGCCTTTGTGTT
TGCGAGATGCATTCCCCACATTCTCATCACTGTCAAGCTGATCAAAGACGCGCACAAGTTTGGGAGAGGCGTGGAGTGGCCGCTCG
CTCTGTTTGGTATGGCTGGAATGACATCCTCAATGTGGGTCTTGGGATTGATCTGTTCATGCTTTTAGAGAGAGAGAGCACAGAGA
AAAGAGAGAGGAC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_564152 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] | 886 | 3e-093 |
| XP_002890465 hypothetical protein ARALYDRAFT_472418 [Arabidopsis lyrata subsp. lyrata] | 886 | 3e-093 |
| XP_002513758 conserved hypothetical protein [Ricinus communis] | 731 | 3e-075 |
| XP_002300986 predicted protein [Populus trichocarpa] | 724 | 2e-074 |
| XP_002307436 predicted protein [Populus trichocarpa] | 724 | 2e-074 |
| Swiss-Prot top hits | Score | e value |
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| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9XHZ7 F8K7.23 | 886 | 2e-093 |
| B9RJ39 Putative uncharacterized protein | 731 | 2e-075 |
| B9GU36 Predicted protein | 724 | 1e-074 |
| B9H7F2 Predicted protein | 724 | 1e-074 |
| B6TCF6 Putative uncharacterized protein | 700 | 8e-072 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G21790.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology (InterPro:IPR006634); Has 127 Blast hits to 127 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | 886 | 1e-095 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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