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Information for unigene UN78521

FASTA Sequence
Unigene ID: UN78521Length: 708 SSR 
GGATGCCCATATGTATAAGCAGCCTTGGTTCTTTTCCAAGGTTTTGATCAAAGCCATGACTAAACCTCCTCCCTTTTCTCTCCTGG
CCTTTGGCTGCTTCCTTTTATTCTTCTTCTTCTCCTTCTCCATTCTCCACCTCCACCGGTATCTTCTCCACCACCACCACCACCAC
CACATGTCCATTCACCACCACCACGGTTCCAGTCTCCACCACCACCGCTGGCCCATTCACCTCCACCACTGGACCATAACCCGCAA
CCACCAATAAAGTCACCACAACCAAATGACCCTTTTGATCAGTCTCCAGTGAAGTTCAGGCGTAGCCCGCCTCCACCACAACAATC
ACACCCAGTGGTTTCTCCTCCGTCTCCTGTTAACTCTCCACCACTGATATATTCTCCACCGCCAACACCAGTTCAACCTCCACCAG
AAACACCTGCCAACTCTCCTCCCCCACGAGCACCAACACGGACAGTAGAAGCATCACCTCCAAGTGAAGAATTCATCATGCCAACA
ATCATTGGCCACCAATATGCATCGCCACCACCTCCAATGTTTCCGGGCTACTAATATTAGAGAGATAATACAAGTTGATGTTATGA
ATCATGTCGTGAGAAGAAAAAAGAAAACCGGGAAAAAATTGAGGAAGACAGAAGAAGAACAAACAAGAGGGCAATGTATCGTAGTG
GCATTAACTCCTTACAATAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_179188 Pollen-specific leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana]3575e-032
XP_002945770 pathogenesis-related protein 1-like protein [Volvox carteri f. nagariensis]2877e-024
ABA41400 pherophorin-C2 protein precursor [Chlamydomonas reinhardtii]2842e-023
XP_002994238 hypothetical protein SELMODRAFT_449338 [Selaginella moellendorffii]2813e-023
XP_002964164 hypothetical protein SELMODRAFT_438863 [Selaginella moellendorffii]2813e-023

Swiss-Prot top hits (Blast detail)Scoree value
Q9XIL9 Pollen-specific leucine-rich repeat extensin-like protein 34585e-045
O81765 Pollen-specific leucine-rich repeat extensin-like protein 44182e-040
Q9LJ64 Pollen-specific leucine-rich repeat extensin-like protein 13412e-031
Q9T0K5 Leucine-rich repeat extensin-like protein 33099e-028
P13983 Extensin2963e-026

TrEMBL top hits (Blast detail)Scoree value
Q3HTK5 Pherophorin-C2 protein2841e-023
Q3HTK6 Pherophorin-C1 protein2822e-023
Q9SBM1 Hydroxyproline-rich glycoprotein DZ-HRGP2812e-023
Q010M7 Predicted membrane protein (Patched superfamily) (ISS)2794e-023
Q4A2S9 Putative membrane protein2794e-023

Arabidopsis top hits (Blast detail)Scoree value
AT2G15880.1 leucine-rich repeat family protein / extensin family protein4593e-046
AT4G33970.1 protein binding / structural constituent of cell wall4192e-041
AT3G19020.1 leucine-rich repeat family protein / extensin family protein3412e-032
AT4G13340.1 leucine-rich repeat family protein / extensin family protein3099e-029
AT2G43150.1 proline-rich extensin-like family protein3062e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members