Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN78550

FASTA Sequence
Unigene ID: UN78550Length: 618 SSR 
GGGATCTCTAATATCTCCAAGTCACACCTCCAAGAGGTTCGATATCTCTCAACTCTCTCTTCTCTTATTATTACTTCTCTTTTGAC
TCTTGTTCCTCCAAATCCTTCTCTTTTACATGTATATTATCCTCTATCCTCCTCGTCTTTTTCTCGTTCAAAGGAGTGTAAAACCT
TTGAATTGATGAAGTATGGTTTGTCCCAAAAAAAAGAAGGATCAATATAGTCTCTTAACTAGTTCATTTTTTTTCATCGTATTGAT
AAATCACAAAATGAAATAGTCACTAGTTTGTTTTAATATTCATCTCTATCAAGTGTAGATACGGTATCTTGAATTACCTTATTGAG
TTAAAGTTTCGTCTCCAAGTGTGTATATATAATCAATACATAGATGGTACATAATCTTCAATTTAATTTTTCTACAGAAGTCAGAT
TCTGGTGAGGATGAGATTTGGGAAGATTGTGGAAGGCTTGAAGTCCAAGATAAAGGCAAGTCTAAGGATGCGGAAGAGATCCTCAT
TATCATCATCGTCATCGTCGTCATCATCATCATCATCATCATCATCATCATCGTATGAGAAGATAGAGAAGACTGACAGTATGAGA
TTTGAGTTAAGAAGCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAD94252 hypothetical protein [Arabidopsis thaliana]2472e-019
XP_002888581 hypothetical protein ARALYDRAFT_475817 [Arabidopsis lyrata subsp. lyrata]2339e-018
AAG00258 F1N21.1 [Arabidopsis thaliana]1721e-010
CBX96744 hypothetical protein [Leptosphaeria maculans]1362e-006

Swiss-Prot top hits (Blast detail)Scoree value
Q8MP30 Uncharacterized histidine-rich protein DDB_G02745571214e-006
P0CF52 Lysine-specific demethylase 7B1198e-006

TrEMBL top hits (Blast detail)Scoree value
Q56YF5 Putative uncharacterized protein2472e-019
Q9FYH4 F1N21.11728e-011

Arabidopsis top hits (Blast detail)Scoree value
AT1G67195.1 MIR414 (MICRORNA 414)2471e-021
AT1G67195.2 MIR414 (MICRORNA 414)2471e-021
AT1G48400.1 F-box family protein1152e-006
AT2G21420.1 zinc finger protein-related1143e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members