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Information for unigene UN78565

FASTA Sequence
Unigene ID: UN78565Length: 686 SSR 
AAAATCGCAAAGGGGAATTGAAGAAGAACACTACTACGATCAACAACGACAAGAACAAGGAAGGGATTTCGATAGCTGAAAAAGTT
GACTCTTCTTCCTAAATTGGATTCTGGGTTTTCTCTTCTTAGGAGAAGAAGCAAGAAAAAAAGGAAAAAGTCAGCCATTGAAGGCG
GAGGAACTTCTCCATGGACAAAAACCCTAGATGGGTGTTTCTCTTCTGAACCATAACATCGCAAAGCTCAGACCTTTTCTTCTACA
TTCATGGAACGATCATCATCATCATCAGATCCCCAAACCCCAAACGACCACCACATCATTGACATCCCATCCTCCTCTTCTCACGA
TAGAATCTCAAACGTTTTGGAGCCTCTACAACACGATCATGATGACGATGTTGAGAGACCTTCCTCCACTGCTTCTCATCCTCCGA
TGTCTGTTCCTCAGCCAGCTACAGTTTCCTCTTCCTCCTCTTCTATGAGGTCTAATCCCACTAGAAGCAACCGCAGGAGGAGAAGT
CCTTTGAACTCTGGTCTTTGGATTTCAATTGAGCTGTTCCTCACTCTTGGCCAGATCGTTGCGGCTATCGTTGTGTTGTGTTTGTC
TAAGCGCGAGCATCCACGTGCTCCCTTGTTTGCTTGGATCGTGGGTTATGCCTGTGGGTGCGTTGCGACGCTCCCGCTTTTGTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869261 hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp. lyrata]4946e-048
CAA18601 putative protein [Arabidopsis thaliana]4857e-047
NP_194986 C3H4 type zinc finger protein [Arabidopsis thaliana]4857e-047
XP_002309588 predicted protein [Populus trichocarpa]3315e-029
XP_002324833 predicted protein [Populus trichocarpa]3281e-028

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O65539 Putative uncharacterized protein AT4g326004855e-047
Q8VY23 Putative uncharacterized protein At4g326004855e-047
B9H9P9 Predicted protein (Fragment)3314e-029
B9IKR5 Predicted protein3288e-029
B9RS95 Ring finger protein, putative3242e-028

Arabidopsis top hits (Blast detail)Scoree value
AT4G32600.1 zinc finger (C3HC4-type RING finger) family protein4853e-049
AT1G80400.1 zinc finger (C3HC4-type RING finger) family protein2892e-026
AT1G15590.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G80400.1); Has 118 Blast hits to 117 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1502e-010
AT1G15600.1 unknown protein1351e-008
AT1G15630.1 unknown protein1261e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members