Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN78586

FASTA Sequence
Unigene ID: UN78586Length: 327 SSR 
AGGCCCTGGAAACACGGCCAAGAAGTACGCCGTGGCGGGGCTTATGGGATTGGCGGGGAGCGAGAAGAGTAAGAAAGTTATGGTTT
CGTACGGAGCTATCGGGTATCTGAAGAAGCTATCGGAGATGGAAGTGATGGGCGCCGATAAACTTCTCGAGAAGCTTGAGCGAGGA
AAGCTCAGAAGCTTCTTTCACCGGCGGTAAACACAAATAAACGGATTTAAAATGGGTCCGAGATGCTAGTTTATATAACCGTTTAA
GTATGTCTTGAAACGCTATCAAAAAGCCCGTTGGGCTTGTAACTCTCTCTCTCTTAAGCTGATATATAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAF78412 Contains similarity to an unknown protein F17K2.25 gi|7485635 from Arabidopsis thaliana BAC F17K2 gb|AC004665. It contains a flagellar FliJ protein PF|02050 domain. ESTs gb|H76945 and gb|AA712775 come from this gene3087e-027
NP_563637 armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana]3087e-027
XP_002889350 hypothetical protein ARALYDRAFT_470092 [Arabidopsis lyrata subsp. lyrata]3061e-026
NP_182096 armadillo/beta-catenin repeat-containing protein [Arabidopsis thaliana]2334e-018
XP_002880193 armadillo/beta-catenin repeat family protein [Arabidopsis lyrata subsp. lyrata]2308e-018

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q93YW3 Putative uncharacterized protein At1g018303085e-027
Q9LQ72 T1N6.25 protein3085e-027
O64651 At2g457202333e-018
B9IC70 Predicted protein2281e-017
B9RDK5 Ubiquitin-protein ligase, putative2281e-017

Arabidopsis top hits (Blast detail)Scoree value
AT1G01830.2 armadillo/beta-catenin repeat family protein3082e-029
AT1G01830.3 armadillo/beta-catenin repeat family protein3082e-029
AT1G01830.1 armadillo/beta-catenin repeat family protein3082e-029
AT2G45720.1 armadillo/beta-catenin repeat family protein2348e-021
AT2G45720.2 armadillo/beta-catenin repeat family protein2348e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members