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Information for unigene UN78597

FASTA Sequence
Unigene ID: UN78597Length: 585 SSR 
GGAAGGTTTTGAAGCAAGTTTTGTTGCTTGCTTAGTGAGTCGCGATAATCGCCCACCCATGGCGAAAGCAAGCCGTGGCCGTCGTT
CACCGTCCGTCTCGGGGTCTTCATCTCGGTCCAGCTCCTCCAGATCTCGTTCCCGTTCTAGATCGCTCTCTTCTTCTTCTTCATTC
CTTCGCGGAGCGTCAGTTCCGGGAGTCGTAGTCCTCCTCCTCCTCCTCCACCTCGTGGAAAAAGGAAAGCTACAGAATCTCTTGTT
CTCCATGTCGGTTCTCTTAGCAGGAATGTAAACGAAGACCATCTGAAAGAAATTTTTGGCAACTATGGTGAAGTTGTACACGTAGA
ACTTGCAATTGATCGAGCTGTTAATCTTCCAAAAGGATATGCTTATGTTGAGTTCAAGGCGAGAGCTGATGCTGAGAAAGCTCTGC
TGTTTATGGATGGTGACCAAATTGATGGAAATGTTGTTAAAGCAAAGTTCACACTACCAGCGCGTCAGAAAGTATCTTCACCCCCT
AAACCTGTCTCAAGTGAACCAAAGAGAGAGGCTCCAAAACCTGATAACGCCGCTGCTGACGTTGATGGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892916 expressed protein [Arabidopsis lyrata subsp. lyrata]5115e-050
NP_173107 protein arginine/serine-rich 45 [Arabidopsis thaliana]5034e-049
NP_973844 protein arginine/serine-rich 45 [Arabidopsis thaliana]5034e-049
AAK76509 putative arginine/serine-rich protein [Arabidopsis thaliana]5034e-049
NP_001185014 protein arginine/serine-rich 45 [Arabidopsis thaliana]5034e-049

Swiss-Prot top hits (Blast detail)Scoree value
Q4P7G1 Eukaryotic translation initiation factor 3 subunit G1511e-009
A8WLV5 Probable eukaryotic translation initiation factor 3 subunit G1502e-009
Q5ZKR5 Nuclear cap-binding protein subunit 21502e-009
Q19706 Eukaryotic translation initiation factor 3 subunit G1492e-009
B5G279 Nuclear cap-binding protein subunit 21483e-009

TrEMBL top hits (Blast detail)Scoree value
Q5E925 At1g166105033e-049
Q94AS1 Putative arginine/serine-rich protein5033e-049
Q9SEE9 Arginine/serine-rich protein5033e-049
B9RI44 Ribonucleic acid binding protein S1, putative5024e-049
A9PFW8 Putative uncharacterized protein4925e-048

Arabidopsis top hits (Blast detail)Scoree value
AT1G16610.1 SR45; RNA binding / protein binding5032e-051
AT1G16610.2 SR45; RNA binding / protein binding5032e-051
AT1G79100.1 arginine/serine-rich protein-related1521e-010
AT2G27330.1 RNA recognition motif (RRM)-containing protein1431e-009
AT4G20030.1 RNA recognition motif (RRM)-containing protein1402e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members