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Information for unigene UN78598
| FASTA Sequence |
| Unigene ID: UN78598 | Length: 786 |
SSR | | GAACTGCAGCAATTCTCTGATGCTGCACGAACGGAGTTGTCAAGAAGAGCCGTTCTGTTCAACGGGGCTAGCTTCCTCCGGTCTAG
AAATGATGATATCAGATCTTCCTTGTTATCCGTATGTTTCTTTAGTGGAGGAGGAGAGAGTAGGATAGATCCTAGAGGTGAGGAAG
GATCATCATCATCATCATCATCATCATCAAACCAGGAGACTTCCAAGAGAAACACAAGCAGTGGACGGAGGTGGACTAATGTCCTC
CTTGCCGTTAACGTTATAATGTATATTGCACAAGTTGCATCTAATGGCAGTGTGTTGACTTGGGGAGCCAAGGTAAACAGCTTAAT
CGATAGAGGTCAGCTATGGAGACTGGCTACATCTTCTGTTCTTCATGCCAATCCTATGCATCTCATGATAAATTGCTATTCTTTGA
ACTCCATTGGACCAACTGCTGAGAGTTTAGGTGGCCCAAAGAGATTCCTCGCCGTTTACTTGACATCTGCAGTTGCAAGTTCAGCA
ATGAGTTACTGGCTCAACAAAGCGCCATCAGTTGGTGCTTCAGGTGCAATATTCGGATTGGTCGGCTCGGTAACTGTGTTTGTCAT
GAGACACAAGCAAATGGTCAGAGGTGGCAATGAAGATCTGTTACAGATAGCTCAAGTTATTGCCTTAAACATGACATTGGGTCTAG
TGTCCAGAGGCATAGATAACTGGGGACATATTGGTGGCTTACTTGGTGGAACTGCAATGGCATGGCTTGTGGGACCACAGTGGAAG
TATGAGTATACA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_001185093 RHOMBOID-like protein 10 [Arabidopsis thaliana] | 1052 | 2e-112 |
| F86382 hypothetical protein F4F7.14 - Arabidopsis thaliana | 1030 | 6e-110 |
| NP_173900 RHOMBOID-like protein 10 [Arabidopsis thaliana] | 1030 | 6e-110 |
| AAG40087 unknown protein [Arabidopsis thaliana] | 1030 | 6e-110 |
| XP_002304070 predicted protein [Populus trichocarpa] | 783 | 3e-081 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P54493 Rhomboid protease gluP | 279 | 3e-024 |
| Q6IUY1 Rhomboid-like protease 3 | 171 | 1e-011 |
| Q695U0 Rhomboid-like protease 1 | 169 | 2e-011 |
| Q695T9 Rhomboid-like protease 2 | 144 | 1e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FRH8 Putative uncharacterized protein F4F7.32 | 1030 | 4e-110 |
| B9GZF8 Predicted protein | 783 | 2e-081 |
| A9PBE1 Putative uncharacterized protein | 777 | 9e-081 |
| B9SZJ8 KOM, putative | 773 | 3e-080 |
| C6TET3 Putative uncharacterized protein | 763 | 4e-079 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G25290.1 ATRBL10 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 10) | 1030 | 3e-112 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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