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Information for unigene UN78599
| FASTA Sequence |
| Unigene ID: UN78599 | Length: 567 |
SSR | | GGGATTTAGGGTTTAAAGAGTTGGGAAGATTGAGAGAGAATTGAGAGAGTCGGGAGCAATGGCGAGCACCAAAGTTCAAAGGATTG
TGACCCAACCTATCAACTTGATTTTTAGGTTTCTTCAAAGCAAAGCGAGGATCCAGATTTGGCTCTTTGAGCAGAAAGATTTGAGG
ATTGAAGGAAGAATCACTGGGTTCGACGAATACATGAACCTAGTGTTGGATGAAGCTGAAGAAGTGAGCATCAAGAAGAACACCAG
AAAACAACTTGGAAGGATTCTACTTAAAGGAGATAACATAACGCTGATGATGAACACGGGAAAGTAATCACACTATTCTCTCAAGT
CTCAAGAAACACTCTCGTGGTGGAGCGGTAGATGGTGTCTTTTCGATTATCTCCCAAGCATTTGCTGAATTGAGCTCTTCTTCTTC
TTCTTCTGTTAACTGACAATGGTTTCTTCTCTTCTTTATCGTGTAATTGCAATGTAGTAAAAGGTTTGAGAAATTATGGAGTTCCG
TGGAATCTAAAGGATGGTATTTGCCTAAAGTTTACTATTGCATTCTCTTCT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_179464 putative small nuclear ribonucleoprotein [Arabidopsis thaliana] | 429 | 1e-040 |
| NP_567844 small nuclear ribonucleoprotein E [Arabidopsis thaliana] | 418 | 3e-039 |
| XP_002454946 hypothetical protein SORBIDRAFT_03g001950 [Sorghum bicolor] | 416 | 4e-039 |
| NP_001045754 Os02g0126700 [Oryza sativa Japonica Group] | 415 | 6e-039 |
| XP_002278114 PREDICTED: similar to small nuclear ribonucleoprotein E [Vitis vinifera] | 410 | 2e-038 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| A4FUI2 Small nuclear ribonucleoprotein E | 302 | 4e-027 |
| P62303 Small nuclear ribonucleoprotein E | 302 | 4e-027 |
| P62304 Small nuclear ribonucleoprotein E | 302 | 4e-027 |
| P62305 Small nuclear ribonucleoprotein E | 302 | 4e-027 |
| A1XQR9 Small nuclear ribonucleoprotein E | 302 | 4e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZV45 Putative small nuclear ribonucleoprotein E | 429 | 1e-040 |
| Q8LAK5 At4g30330 | 418 | 2e-039 |
| C5XL26 Putative uncharacterized protein Sb03g001950 | 416 | 3e-039 |
| B8AGZ5 Putative uncharacterized protein | 415 | 4e-039 |
| Q6Z2M5 Os02g0126700 protein | 415 | 4e-039 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT2G18740.1 small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative | 430 | 5e-043 |
| AT4G30330.1 small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative | 419 | 1e-041 |
| AT2G18740.2 small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative | 344 | 5e-033 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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