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Information for unigene UN78650

FASTA Sequence
Unigene ID: UN78650Length: 726 SSR 
GGGCTTCGTGTAGCAGATAATGCCAAGGTCAATTCCGTAAATCTCGACAACAGACTTTCCGACAAGCAGCTTCTTTAATCCCTCTC
TCTCTCTCTGAATGCTTTAAGCTGTTGCAGATAGTAGTTTGCATTCTCACTCTTTGTCTGAACAAAACACAAACTTTAATGTTAGA
TCTGTCTTTTACGTCGCTACGAAGTCTTCTTTCCTTCCTCCGCATACCTTACTCACTACCCCATAAAAGCCCTAAACAACACTTCG
TCTTCTTCTTCTTCTTCCACTCGAGATCTCAAAATCAAAATGTCGTCTCCCAAGCCATACACCAAGCGTACTTCTCCTCCGCGAAG
CACCGCCGCCGCTCCGCCGCCGTCTGTGTCCGTCTCCCCCACCGGTGGAGGATTCTTCTCTAATAAGTCTGTCCTACTCGGTATAT
TCCTCCTCGCCTTGCCGTTGTTTCCTTCTCAGGCTCCCGATTTCGTCGGAGAGACGGTTCTCACCAAGCTCTGGGAACTGATTCAT
CTCCTGTTCGTCGGCATTGCCGTCGCTTACGGTTTGTTTAGCCGTAGGAATGTCGAATCAAATGTGGAGTTAAGGAGGAGTGGTGT
AGATGATGAGTCTTCACTGTCTTACTTGTCTAGAATCCTCCAGTTTCCTCTGTTTTCGACGAGGATGAGAAAGAGGAGGAGTCAGA
GAGTTCTTCTCTGGTGACCAAGTCTGAGTCTTTGTCTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878332 hypothetical protein ARALYDRAFT_907560 [Arabidopsis lyrata subsp. lyrata]3835e-035
NP_191597 uncharacterized protein [Arabidopsis thaliana]3801e-034
ADN34231 hypothetical protein [Cucumis melo subsp. melo]2473e-019
XP_002511605 hypothetical protein RCOM_1608690 [Ricinus communis]2312e-017
XP_002272713 PREDICTED: hypothetical protein [Vitis vinifera]2285e-017

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9M221 Putative uncharacterized protein T8B10_403808e-035
B9RD16 Putative uncharacterized protein2312e-017
A5BYA3 Putative uncharacterized protein2241e-016
B9SZP6 Putative uncharacterized protein2151e-015
B9GYL9 Predicted protein2141e-015

Arabidopsis top hits (Blast detail)Scoree value
AT3G60380.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G16790.1); Has 5716 Blast hits to 3635 proteins in 329 species: Archae - 2; Bacteria - 249; Metazoa - 2628; Fungi - 569; Plants - 209; Viruses - 24; Other Eukaryotes - 2035 (source: NCBI BLink).3904e-038
AT4G16790.1 hydroxyproline-rich glycoprotein family protein1512e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members