 |
Information for unigene UN78656
| FASTA Sequence |
| Unigene ID: UN78656 | Length: 757 |
SSR | | GGGTTACAAGAAACTAAAAGAAAAAACAGTGCCCTTTCGCGCAAGCTTTGAGTCGTCGTCGTCGTCTCTTCTCTCTCTTTCGAATC
CGCCGTCTCCCATACGCTTTTCCGCCGGCGCGGTTAGATCGTACAAAGCCTAAGATAAGAGAGAAAATGTGGGGAATCTTGAGGCG
AAGTGCTGTCGATGGAGGAGGCTTCTCTGCTGCTTCGTCTCTCGGAAAGACGCGACTCGCTTTGGTTTCCGCAAGGAGCTATGCAG
CTGGTTCAAAAGAGATGACAGTAAGAGACGCTTTAAACTCTGCAATTGATGAGGAGATGTCTGCAGATCCTAAAGTTTTTGTCATG
GGTGAAGAGGTTGGACAATATCAAGGTGCCTACAAGATCACTAAAGGCCTTTTGGAGAAGTATGGTCCTGAGAGAGTTTACGATAC
CCCTATTACCGAGGCTGGATTTACTGGAATTGGAGTTGGTGCCGCCTATGCTGGCTTAAAGCCCGTTGTAGAATTTATGACGTTCA
ACTTTTCTATGCAGGCAATTGATCATATCATAAATTCTGCGGCAAAGTCGAATTACATGTCTGCTGGACAGATAAATGTACCCATT
GTCTTTAGAGGACCCAATGGTGCTGCTGCTGGTGTCGGTGCTCAGCATTCTCAGTGCTATGCAGCATGGTACGCTTCAGTACCTGG
TTTAAAAGTTCTTGCTCCATATTCAGCTGAGATGCTCGTGGTCTTCTTAAGCTGCTATTAGAGACCTGA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34206 unnamed protein product [Thellungiella halophila] | 886 | 3e-093 |
| XP_002864080 pyruvate dehydrogenase E1 component beta subunit, mitochondrial [Arabidopsis lyrata subsp. lyrata] | 883 | 6e-093 |
| AAA52225 pyruvate dehydrogenase E1 beta subunit [Arabidopsis thaliana] | 862 | 2e-090 |
| NP_199898 pyruvate dehydrogenase E1 component subunit beta [Arabidopsis thaliana] | 862 | 2e-090 |
| CBI38172 unnamed protein product [Vitis vinifera] | 773 | 3e-080 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q38799 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial | 862 | 8e-092 |
| P52904 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial | 700 | 5e-073 |
| Q86HX0 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial | 611 | 1e-062 |
| O44451 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial | 587 | 6e-060 |
| Q09171 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial | 587 | 6e-060 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6Z1G7 (Rice Genome Annotation Project) pyruvate dehydrogenase E1 component subunit beta | 766 | 2e-079 |
| B8B945 Putative uncharacterized protein | 765 | 2e-079 |
| B7EWY7 (Rice Genome Annotation Project) pyruvate dehydrogenase E1 component subunit beta | 755 | 3e-078 |
| B9RFW4 Pyruvate dehydrogenase, putative | 753 | 5e-078 |
| Q9ZQY3 Putative uncharacterized protein | 752 | 6e-078 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G50850.1 MAB1 (MACCI-BOU); catalytic/ pyruvate dehydrogenase (acetyl-transferring) | 862 | 7e-093 |
| AT1G30120.1 PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA); pyruvate dehydrogenase (acetyl-transferring) | 388 | 7e-038 |
| AT2G34590.1 transketolase family protein | 383 | 3e-037 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
