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Information for unigene UN78675
| FASTA Sequence |
| Unigene ID: UN78675 | Length: 669 |
SSR | | GTCTTTCTCTCTCTTCTTCAATGGACACATAGCAATCATGACTACCGAAGAGAAAGAGATCCTCGCCGCCAAATTGGAAGAACAAA
AGATCGATCTCGATAAGCCTGAAGTTGAGGACGATGAGGATGACTCCGACGATGATAAAGATGATGATGATGATGCGGAGGGGCAA
GATGGAGAGGGAGGAGGAAAGTCAAAACAAAGCAGAAGTGTCACCGTCAAAAAGAGCAAGAACATACGTAATCTTCGGAGAGGCCA
AGATCGAAGACCTGAGCTCTCAGATGCAGTCGCAAGCTGCGGAGCAGTTCAAGGCTCCGGATCTCAGCAAGGTGATCAAGGGCGAA
TCTTCGTCGTCCACCGCTGCTGCAGTGGTGCAGGATGATGATGATGAGGAAGTCGACGAGGAAGGTGTTGAGCCAAAGGACATTGA
GTTGGTGATGACGCAAGCAGGTGTGCCTAGGCCAAGGGCCGTGAAGGCTCTCAAGGCTGCTGATGGAGATATCGTCTCTGCCATCA
TGGAGCTTATCACCTAAACCAAAAATGTTTTCCAACTTTAGATGTGGTTTTAACATGAGTTATATGTGTCCCAGAGATTTTCAAAA
GGTTTCGCAAGGTTTTTGTTTCTATCTTGAAGTGATTTTCAATGTTGTATCAGTATTATAGTTTGGT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002871590 hypothetical protein ARALYDRAFT_909339 [Arabidopsis lyrata subsp. lyrata] | 404 | 2e-037 |
| XP_002521293 nascent polypeptide associated complex alpha subunit, putative [Ricinus communis] | 351 | 2e-031 |
| XP_002318496 predicted protein [Populus trichocarpa] | 343 | 2e-030 |
| XP_002874632 hypothetical protein ARALYDRAFT_489891 [Arabidopsis lyrata subsp. lyrata] | 342 | 3e-030 |
| NP_192786 Nascent polypeptide-associated complex subunit alpha-like protein 4 [Arabidopsis thaliana] | 340 | 4e-030 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6ICZ8 Nascent polypeptide-associated complex subunit alpha-like protein 3 | 413 | 7e-040 |
| Q9LHG9 Nascent polypeptide-associated complex subunit alpha-like protein 1 | 396 | 7e-038 |
| Q9SZY1 Nascent polypeptide-associated complex subunit alpha-like protein 4 | 340 | 2e-031 |
| Q9M612 Nascent polypeptide-associated complex subunit alpha-like protein | 332 | 2e-030 |
| Q8LGC6 Nascent polypeptide-associated complex subunit alpha-like protein 5 | 327 | 7e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9P8T1 Putative uncharacterized protein | 358 | 2e-032 |
| A9PA21 Putative uncharacterized protein | 356 | 4e-032 |
| B9GXB0 Predicted protein (Fragment) | 356 | 4e-032 |
| B9SHV0 Nascent polypeptide associated complex alpha subunit, putative | 356 | 4e-032 |
| B9S5M4 Nascent polypeptide associated complex alpha subunit, putative | 351 | 2e-031 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G13850.1 NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3) | 414 | 5e-041 |
| AT3G12390.1 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 397 | 5e-039 |
| AT4G10480.1 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 341 | 2e-032 |
| AT4G10480.2 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 341 | 2e-032 |
| AT1G33040.1 NACA5 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5) | 328 | 5e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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