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Information for unigene UN78700

FASTA Sequence
Unigene ID: UN78700Length: 596 SSR 
GGACTCGTCAGAGATTTGCCGCAGAACGAGCACGTATGCTGTCAGCAAGATTTGGATCAACACCTGGAGGAATCACTCCACCGGCT
AATACTAATAATAATCTCCAAGGCATGTCTCTATCCACAGGTGGTGGTGGTAACAACATCAATACTCTCCTGCAGCAACAACTACA
TCAGCAACAGCAAGTTTCAGCTGGCTCTTCTCAACCAAGCATGATCCCAGGGTTTAGCAACAACCCACAAGTTCATGCCCAGATGC
AGTTCATGGCACGCCAACAACAACAACAACAACAAGCTTTCTCCTTTGGGCCGAGATTGCCTCTTAATGCAATACAGACGAATGCA
GGATCAACGGCTTCACCGAATGTCATGTTTGGCAACAACCAAGTTAATAACCCTGCAGGTGCATCCATCAACCAGCCTTCGTTTAG
TCACCCGATGGTTAGGTCTTCCACGGGTTCTGGATCCGGGTCCGGCTTAGGCTTAAACTAAGACCCCATCTCTTTAGCTTATGTAG
CCTATCAGAGTTTTCAAAATTATTTTGAGCCAAGTTATTGCTTTGAGACCTTAGTGTTGTTATAAGATGAGTGTCTGCAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893181 ATSWI3C [Arabidopsis lyrata subsp. lyrata]6593e-067
NP_173589 SWI/SNF complex subunit SWI3C [Arabidopsis thaliana]6325e-064
BAJ93481 predicted protein [Hordeum vulgare subsp. vulgare]1997e-014
BAF93190 putative SWIRM domain containing protein [Hordeum vulgare]1891e-012
EEC67805 hypothetical protein OsI_35371 [Oryza sativa Indica Group]1461e-007

Swiss-Prot top hits (Blast detail)Scoree value
Q9XI07 SWI/SNF complex subunit SWI3C6322e-065

TrEMBL top hits (Blast detail)Scoree value
A8R7D4 Putative SWIRM domain containing protein (Fragment)1897e-013
B8BJG9 Putative uncharacterized protein1467e-008
B9G9R2 Putative uncharacterized protein1422e-007
Q53KK6 Os11g0183700 protein1422e-007

Arabidopsis top hits (Blast detail)Scoree value
AT1G21700.1 ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C); DNA binding6332e-066

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members