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Information for unigene UN78729

FASTA Sequence
Unigene ID: UN78729Length: 600 SSR 
GGAACCGGTGGATTGCTCCGCGCCGATCAGATCCGATGTCGCTGCTAAACCAACTCTTCAACCGTGGAGTCTTTGGCGCTAAATGG
TTCCTCCTCCTCCTTCTTCTTCTTCTTCTTCAAAATTGCCTTAATCGATCCGATCAGTTTCTCTTTTCTTCAGTTAATTTTATGTT
ATTGGCAGCAAAACATCCTTAAACTTCGCGATTGCTCGGATGAAATTACTACAAAACAAGAGAGACATGCATCTCAAACACATGAA
GAAGGAGATCGCTCAGTTCTTACAAGCTGGGCAAGAACCCATCGCTCGAATCCGGGTGGAGCATGTGATCAGAGAAATGAATCTAT
GGGCAGCTTATGAGATCTTGGAGCTGTTCTGCGAGTTTGTGCTTGCTCGTGTTCCAATTCTTGAAAGTCAAAAGGAATGTCCGAGA
GAGTTGAGAGAAGCTATTGCTAGCATTATCTTTGCTGCTCCAAGGTGCTCTGAAGTGCCTGATCTTCTTCAGCTTAAGAATCTTTT
TGGTACTAAATATGGAAAAGAGTTTATCATGGTTTCTTCTGAGCTCCGTCCTGATTCTGGTGTCAATCGTACAATCATTGAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893427 hypothetical protein ARALYDRAFT_890165 [Arabidopsis lyrata subsp. lyrata]6801e-069
NP_564235 Regulator of Vps4 activity in the MVB pathway protein [Arabidopsis thaliana]6746e-069
AAM66100 unknown [Arabidopsis thaliana]6746e-069
XP_002533970 protein with unknown function [Ricinus communis]6102e-061
ABK94695 unknown [Populus trichocarpa]6002e-060

Swiss-Prot top hits (Blast detail)Scoree value
Q3ZBV1 IST1 homolog2399e-020
P53990 IST1 homolog2399e-020
Q9CX00 IST1 homolog2399e-020
Q568Z6 IST1 homolog2399e-020
Q5R6G8 IST1 homolog2326e-019

TrEMBL top hits (Blast detail)Scoree value
Q8L995 Putative uncharacterized protein6744e-069
Q9C6L2 At1g25420/F2J7_166744e-069
B9T6V1 Putative uncharacterized protein6101e-061
A9PE92 Putative uncharacterized protein6002e-060
B9P6F5 Predicted protein5902e-059

Arabidopsis top hits (Blast detail)Scoree value
AT1G25420.1 unknown protein6743e-071
AT1G25420.2 unknown protein4395e-044
AT1G25420.3 unknown protein4395e-044
AT1G34220.2 unknown protein4379e-044
AT1G34220.1 unknown protein4281e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

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