Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN78743

FASTA Sequence
Unigene ID: UN78743Length: 483 SSR 
GGAAACAACAACAAACAAACAGATCCAACAGAGCAAATCTAGAGAGAGAGAGAGAGAGATGGTGACGAAGACGGAGGAGAGAGAGC
TAAACCAACTGGAGAACCAAGTGGAGAACGGAGGCGGAGGCGTTTGGGAGTATCTCTGCCTCGTTCGTAAGCTCAAGGTTCGCCGA
TCAGAGATGGTGCTCAAGCACGGTCTCTCGATCCTGAACGATCCGGGGAAGCGATCCTCTCTTGGTCCAGATGAATGGACGCTATA
TGAGCAGGTAGCAGTTGCAGCTATGGACTGTCGGTCTCTTTCTGTTGCACAGAATTGCATCAAGGTTCTCCAGAAGAAGTTTCCGG
AGAGTAAACGTGTGGGAAAGCTGGAAGCTTTGCTTATAGAAGCTAAAGGAATGTGGGAGGAGGCTGAAAAGGCCTATTCAATCCTT
TTGGAGGATAATCCACTCGATCAAGTGATACACAAAAGAAAGGTGGCTATGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882376 binding protein [Arabidopsis lyrata subsp. lyrata]6787e-070
NP_850995 prenylyltransferase-like protein [Arabidopsis thaliana]6733e-069
NP_566239 prenylyltransferase-like protein [Arabidopsis thaliana]6349e-065
ACU19211 unknown [Glycine max]5991e-060
NP_198174 O-linked GlcNAc transferase-like protein [Arabidopsis thaliana]5953e-060

Swiss-Prot top hits (Blast detail)Scoree value
Q6TGY8 Tetratricopeptide repeat protein 352021e-015
Q6INS3 Tetratricopeptide repeat protein 35-A2002e-015
Q5M7J9 Tetratricopeptide repeat protein 352002e-015
Q8AVU9 Tetratricopeptide repeat protein 35-B1983e-015
Q5R882 Tetratricopeptide repeat protein 351795e-013

TrEMBL top hits (Blast detail)Scoree value
Q9CAU9 Contains similarity to O-linked GlcNAc transferases6732e-069
Q93WC8 Putative uncharacterized protein At3g048306346e-065
C6TBK9 Putative uncharacterized protein5997e-061
B9MZF5 Predicted protein5943e-060
B9I5D8 Predicted protein5916e-060

Arabidopsis top hits (Blast detail)Scoree value
AT3G04830.1 binding6733e-071
AT3G04830.2 binding6349e-067
AT5G28220.1 binding5953e-062

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members