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Information for unigene UN78760

FASTA Sequence
Unigene ID: UN78760Length: 357 SSR 
GGGAGAGAGAGAGAGAGAGAGCAACCAAAGTTAATCTCTTATCTATCTTTCTTTGGCGTTGGATATTTCAGATGTACGGAATCGAC
GCAGCTTCAGGTGCTGCTGTTTCAGCTCTTGGTATCTCCCCTGGAGACCATGTCTTGGATCTTTGTGCTGCTCCCGGTGCTAAACT
GTGTATGATGCTAGACCTACTTGGTGACAATGGTACTGCAACAGGTGTCGATGTTGCAAGGCATCGCCTCTCTGCCTGCAGAACCA
TGCTTCAAAAATATGGTCTCGGTGATAGGAGTCGACTCTTCCTTGCTGATGGAACTACTTTCTCACTTCCACCTACCACAAACCTA
CCTTGTGGTTCAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866769 hypothetical protein ARALYDRAFT_496995 [Arabidopsis lyrata subsp. lyrata]4484e-043
AAS76769 At5g66180 [Arabidopsis thaliana]4475e-043
NP_001032160 S-adenosyl-L-methionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana]4475e-043
NP_001032161 S-adenosyl-L-methionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana]4475e-043
NP_201419 S-adenosyl-L-methionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana]4475e-043

Swiss-Prot top hits (Blast detail)Scoree value
Q96CB9 Putative methyltransferase NSUN41148e-006

TrEMBL top hits (Blast detail)Scoree value
Q2V2U2 Putative uncharacterized protein At5g66180.34474e-043
Q2V2U3 Putative uncharacterized protein At5g66180.24474e-043
Q6NLP8 At5g661804474e-043
C6THT0 Putative uncharacterized protein3685e-034
B9GZ00 Predicted protein3632e-033

Arabidopsis top hits (Blast detail)Scoree value
AT5G66180.1 LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); BEST Arabidopsis thaliana protein match is: NOL1/NOP2/sun family protein (TAIR:AT1G06560.1); Has 5021 Blast hits to 4182 proteins in 1157 species: Archae - 270; Bacteria - 3133; Metazoa - 499; Fungi - 156; Plants - 103; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink).4471e-045
AT5G66180.2 unknown protein4471e-045
AT5G66180.3 LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); BEST Arabidopsis thaliana protein match is: NOL1/NOP2/sun family protein (TAIR:AT1G06560.1); Has 4894 Blast hits to 4168 proteins in 1153 species: Archae - 264; Bacteria - 3020; Metazoa - 496; Fungi - 156; Plants - 99; Viruses - 0; Other Eukaryotes - 859 (source: NCBI BLink).4471e-045

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members