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Information for unigene UN78793
| FASTA Sequence |
| Unigene ID: UN78793 | Length: 833 |
SSR | | GGATTTTAGCCTGTTTTTTCAAATATAAATGATTTTTTTTATTACAAAGTCGTCCCAACATGGTCTGATTGATGATTACTAAATAT
AAAGACATAGCGAACAACATATTACAAATCCGAACAAACACACGAAGTCATTGGTAACTAATCACAAAATCCATCACCAGACACAC
ACACACTATGGCTTTACTCATCGCACCCAAGCAACTGCATCGATCTCATCTCTCGCTTTCTTATATAACTCAAGCCTCTGCGCACA
CTCTAGTCTCCTCCCCATCAATGCCGGATCTTCATCTAGTAACTCTCCCAACTGTTTCCCCTCTCTCTTGCTGATCTGACTGTAGA
AGTAATTAAGCAACGCGAGCTTGGCTTGCCTAACCTGACAGTAAACACAAGCCTTTGGAATGGTGTTTCGAAGTGTGTCCGAAACC
ATGCTGACATAAGCGGATACATTCGATGCTATCCTTCTGAAATGTCCGTCTCCGTATTGGTCTTGCGTTGCGGGAGAAGGAGAAGC
AGCGGTTTGGTTCTTGCTGTTGTTGGTGATCACTGGTCTTTCCATTTCTTGAGGAAGTTTCCTGAAGAACTCGGCTGTTAGATAAG
CAGACTCCATCTCAACAAGTCGAATAACTGACTTCTTGCTTTCTTCCCTGAACTTCTCCAAGGAGGTGTTCGCTGCTGCAGCTAGC
TCCACTTGCAGTGAAGGGAAACGCTTTAGCTCCTGAGTTTCTGCTATTGACTTCCTCACAAGCTCTTTCAAGACAAAGTGAACAGC
ATCCACAGAAGCTTCAGCTGGACCTCTAAAGTACCAAGCGCCCCTTCATCAGACGCGAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002878322 hypothetical protein ARALYDRAFT_486488 [Arabidopsis lyrata subsp. lyrata] | 955 | 3e-101 |
| NP_567094 dynamin-related protein 1E [Arabidopsis thaliana] | 933 | 1e-098 |
| AAL88715 dynamin-like protein E [Arabidopsis thaliana] | 933 | 1e-098 |
| AAF22292 dynamin-like protein 4 [Arabidopsis thaliana] | 874 | 8e-092 |
| XP_002526508 dynamin, putative [Ricinus communis] | 753 | 9e-078 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FNX5 Dynamin-related protein 1E | 933 | 5e-100 |
| Q8LF21 Dynamin-related protein 1C | 661 | 2e-068 |
| Q8S3C9 Dynamin-related protein 1D | 433 | 5e-042 |
| Q39828 Dynamin-related protein 5A | 299 | 2e-026 |
| Q39821 Dynamin-related protein 12A | 292 | 1e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SKH8 Dynamin, putative | 753 | 6e-078 |
| A5CA51 Putative uncharacterized protein | 748 | 2e-077 |
| B9MVC5 Predicted protein | 739 | 3e-076 |
| C5WRE6 Putative uncharacterized protein Sb01g028560 | 702 | 5e-072 |
| B9T4N0 Dynamin, putative | 686 | 4e-070 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G60190.1 ADL1E (ARABIDOPSIS DYNAMIN-LIKE 1E); GTP binding / GTPase | 934 | 4e-101 |
| AT1G14830.1 ADL1C (ARABIDOPSIS DYNAMIN-LIKE PROTEIN 1C); GTP binding / GTPase | 661 | 2e-069 |
| AT2G44590.2 ADL1D (ARABIDOPSIS DYNAMIN-RELATED PROTEIN 1D); GTP binding / GTPase | 434 | 4e-043 |
| AT2G44590.3 ADL1D (ARABIDOPSIS DYNAMIN-RELATED PROTEIN 1D); GTP binding / GTPase | 434 | 4e-043 |
| AT2G44590.1 ADL1D (ARABIDOPSIS DYNAMIN-RELATED PROTEIN 1D); GTP binding / GTPase | 424 | 5e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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