RadishBase

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Information for unigene UN78796

FASTA Sequence

Unigene ID: UN78796	Length: 509	SSR
GTGCAACTTTCTTTATATATATATACAGACATAATCAAGGATGCTGTCTGGAACTGGGAACATGATTAGAAGTTCGGTTCTGATGG AGAAGGTTAAACCAAATAGAGTGAAGTATCATATGAAACACGTCGTATCTCCTAGGTTTAGGACTCCACAGAAAATGTCTCTGAAC CATCTTCACGTTGCTCTGCATCTTCAGATATCTCCTCATCGGAATCTCCAACAGTATCTCCTTAAGCCGTGGAATGTCCTTCTCCA GCACAACAACTGAGAACGCAGACCAATCAAGCACTTCGCTGAACGGCAAGACGAAGTTATCAGCGATGATTACGGGGACGCACTCG TAGTAGATAGCCTCAACGATTCTTGGGCTGTTCACTTCGTAACCCATTGGACATAGACAGTATTTGCTCGACTTCATGTGCTGCAC GTAAGTCATTTTACGAGCTACGTTGTGCGGAAGCGGGCCGTAGATTTTCATGTCGTCGTCTTTGTTTCTCCAGTGTTTT

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_567512 Exostosin family protein [Arabidopsis thaliana]	773	1e-080
CAB10449 limonene cyclase like protein [Arabidopsis thaliana]	773	1e-080
XP_002870133 exostosin family protein [Arabidopsis lyrata subsp. lyrata]	771	2e-080
XP_002303362 predicted protein [Populus trichocarpa]	658	3e-067
NP_001190743 Exostosin family protein [Arabidopsis thaliana]	652	1e-066

Swiss-Prot top hits (Blast detail)	Score	e value
Q9SSE8 Probable glycosyltransferase At3g07620	405	3e-039
Q3E7Q9 Probable glycosyltransferase At5g25310	405	3e-039
Q9FFN2 Probable glycosyltransferase At5g03795	390	2e-037
Q3EAR7 Probable glycosyltransferase At3g42180	372	2e-035
Q9LFP3 Probable glycosyltransferase At5g11130	357	1e-033

TrEMBL top hits (Blast detail)	Score	e value
Q8RXU2 Putative uncharacterized protein At4g16745	773	9e-081
B9GYD4 Predicted protein (Fragment)	658	2e-067
B9SXE7 Catalytic, putative	646	5e-066
C5XEZ6 Putative uncharacterized protein Sb03g008610	595	4e-060
B8ACU5 Putative uncharacterized protein	591	1e-059

Arabidopsis top hits (Blast detail)	Score	e value
AT4G16745.1 exostosin family protein	773	7e-083
AT5G19670.1 exostosin family protein	569	3e-059
AT4G32790.1 exostosin family protein	496	1e-050
AT5G25820.1 exostosin family protein	485	2e-049
AT5G11610.1 exostosin family protein	427	1e-042

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


7	1			100%

Unigene Members