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Information for unigene UN78969

FASTA Sequence
Unigene ID: UN78969Length: 801 SSR 
GAAAACATTTCGTCTTTCTTATTCCTTTTTAACAATTCTTAATTTCATTAATTAGTTTATTAGAATCACCTACATAGCCCCATAGG
CCCTAAACCCCTAACAACGGAACAATGTGTGTGTGTGTGCTTCCATCATTACGGAAGAAACAGATACCGGAACCGTGAATCAAAAG
GAATCACACCGCATTTGCTACTAGATGAATCCAGAAAGCCCCACCGTTGTCTCCGGTGAATACGCTGCTCAACAAATGCGGCTTGG
CGAGGAGGCAAGTGCCGTGAGATCCACAGAGCGACCTTGCTGTCGTCGACAAAATTCTTGCCGAAACGGTGAAGCATCTTGGGTAC
AATCAACTTCCCCCTGGAGCTCACTCCCACTGACGCCTGGATATAATCTTTCTGAGCGTCTTCAAGTTCCTCTCCCACGTTCTCCG
CTGTGTATATCCTCACCGCTGGCGATGAGTGCATTCCGCAGCTGAAAGCGAAAGACACTAGAGGTTCATGTTTACTTATCCCTGCC
TGTTCCTGCTCTTCTGCTACTTTCAGCTTGAGAATGGAGAGAAGCAGAGCAATCTGAGGTCGATGCAGAGGAGGGTTCATCTGTAG
AGTCATGTATTCTATTGTTGCTGCATTGTATGAATGCTCACCAACTGTATAAGCAGCCTTTTGCATCAGTGAAAAGAACTTTAAGT
CGGTTTTCGGTACGCCATAAGCCAAGTATGCCTGAGTCAGACAATCGACTGTAAATATGTATTATGGAAATCAAAACTCAGTGAGA
TTTGGAAGACATTATTTACATGCATGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892919 hypothetical protein ARALYDRAFT_471871 [Arabidopsis lyrata subsp. lyrata]8845e-093
AAM67295 unknown [Arabidopsis thaliana]8837e-093
AAG09084 Unknown Protein [Arabidopsis thaliana]8756e-092
NP_564005 uncharacterized protein [Arabidopsis thaliana]8756e-092
BAJ33667 unnamed protein product [Thellungiella halophila]6946e-071

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8LFD4 Putative uncharacterized protein8835e-093
Q8L7U6 At1g16750/F19K19_268754e-092
Q9FWQ9 F17F16.4 protein8754e-092
Q56W79 AT3G13000 protein6846e-070
Q9LSH9 At3g130006846e-070

Arabidopsis top hits (Blast detail)Scoree value
AT1G16750.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: transcription factor (TAIR:AT3G13000.2); Has 420 Blast hits to 403 proteins in 70 species: Archae - 0; Bacteria - 56; Metazoa - 34; Fungi - 2; Plants - 297; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).8762e-094
AT3G13000.2 transcription factor6843e-072
AT3G13000.1 transcription factor6843e-072
AT4G37080.2 unknown protein3162e-029
AT4G37080.1 unknown protein3162e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members