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Information for unigene UN78978

FASTA Sequence
Unigene ID: UN78978Length: 739 SSR 
GGAAGGTTGGGGAAAGGCCTTCGCAGATATAAAAAAAGCTAAAGAGAGAGAGAGAGAGAATGTCATGTTAGTTTGATTGATTCCTC
TCGTATAGTAAATTAGGGTTTCCTATTTGATTTCATCCCCTTTCGAGCTCTCAATCTCCCGACGCCCTTCCTCCTCTGGCTCCAAA
ACCCTAACTTTTGCTTTCGCTCACTCTATTCGCTTTTGCTCGGGATCGATTTGGGCGTTTGGACGTGGAGGAGGGAATCAGTGATG
GGCGCCCCGGATAAGCCTCAATCTAATTCCAATTCGATGCAGAGAGTGAAGGTGTATCATTTGAATGAAGATGGTAAATGGGATGA
TAGAGGGACTGGTCATGTGAGCATCGACTACGTGGAGCGTTCTGAAGAACTCAGTCTATGTGTAATCGATGAAGAAGATAACGAGA
CGTTGCTTGTGCATCCCATCAACACTGAGGATATTTACAGGAAGCAAGAAGACACAATAATCTCATGGAGAGACCCGGAGCGATCA
ACAGAATTGGCTTTGAGCTTTCAAGAGACTGCGGGTTGCTCTTATTATGGGATCAGATCTGCACTATGCAAAGGAACTTGCATTTC
AGCTCTCTGAACAGTGAACCATTCCACAGCCTGAATAGCGAATTGAGGGAGCTTCCTGCTGTAGAGCTTACTACACTTCCCCTAAT
ACTAAAGATTGTTACAGAGACGGCATGACAGATCAGATGCGTTTAACTGAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_187323 component of IIS longevity pathway SMK-1 domain-containing protein [Arabidopsis thaliana]5199e-051
XP_002884605 binding protein [Arabidopsis lyrata subsp. lyrata]5199e-051
NP_001189831 component of IIS longevity pathway SMK-1 domain-containing protein [Arabidopsis thaliana]5199e-051
AAG50988 hypothetical protein; 8379-15114 [Arabidopsis thaliana]4624e-044
XP_002312340 predicted protein [Populus trichocarpa]4382e-041

Swiss-Prot top hits (Blast detail)Scoree value
Q6INN7 Serine/threonine-protein phosphatase 4 regulatory subunit 32472e-020
Q7ZX60 Serine/threonine-protein phosphatase 4 regulatory subunit 3-A2443e-020
Q6DFT3 Serine/threonine-protein phosphatase 4 regulatory subunit 32443e-020
Q6IN85 Serine/threonine-protein phosphatase 4 regulatory subunit 3A2418e-020
Q6P2K6 Serine/threonine-protein phosphatase 4 regulatory subunit 3A2418e-020

TrEMBL top hits (Blast detail)Scoree value
Q8LPS4 At3g06670/T8E24.105197e-051
Q9M7X4 F3E22.19 protein4623e-044
B9HIQ7 Predicted protein4382e-041
B9HWX8 Predicted protein4382e-041
B9RZN3 Putative uncharacterized protein4382e-041

Arabidopsis top hits (Blast detail)Scoree value
AT3G06670.1 binding5194e-053
AT5G49370.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: binding (TAIR:AT3G06670.1); Has 302 Blast hits to 302 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 68; Plants - 33; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).3546e-034

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members