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Information for unigene UN78985

FASTA Sequence
Unigene ID: UN78985Length: 657 SSR 
GGAGCAAAAGAGAGAGAGAAAGAGAGCGATACGTAGAGAGGGAAGAGAGAGAGAGGTTGTGGTATTGGGTCGTGGAAGATCACAGT
GTCCCTACAATGTCTGTGAAGAAGAGCTTCTCGGCGGCTGAGATTCCGGATGAGCAAGGGGATGGTGGTAGAGACCAACAACAACA
ACTCCACCGATTTGACCCGGAAGCTGAAGAGAACGAACCAGAGGATCTACAGGAGGAGGAGACGGTGGTTGAGAAGAAAGACGAAG
AAGAAGTGAAACGCGACGAAGCGGAGGAGGAGGAGGAAGTAGTAGAAGAAGAAGAAGAAGATAAGGAAGATGGTGATGAAGATGCA
GAAGAGGAGGAAGAAGAAGAAGATTCTAAGGAGAAAAGTCCATCAGGAGACAAATCAGAGTTTGTGGAAATTGATCTAGGGGAAAT
CCGTAAAGACGTCCAGTGTCCTATTTGCTTAGGAATTATAAAGAAAACAAGGACTGTGATGGAATGCCTGCACCGCTTCTGCCGGG
AATGTATTGACAAGTCAATGAGATTAGGGAACAACGAATGTCCTGCTTGCAGAAACATTGTGCAAGCCGTCGTTCTCTTAGAGACG
ACCCAAAGTTTGATGCTCTTATTGCTGCTTTGTTCACTAATATCGACAGCTATGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAB10113 unnamed protein product [Arabidopsis thaliana]4623e-044
NP_199241 putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]4623e-044
XP_002863599 predicted protein [Arabidopsis lyrata subsp. lyrata]4623e-044
XP_002328052 predicted protein [Populus trichocarpa]3621e-032
NP_001184901 ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]3566e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q75JC9 Uncharacterized protein DDB_G02716701923e-014
P13816 Glutamic acid-rich protein1861e-013
Q9EPQ2 X-linked retinitis pigmentosa GTPase regulator-interacting protein 11824e-013

TrEMBL top hits (Blast detail)Scoree value
Q9FKW0 Similarity to unknown protein4622e-044
B9MYF9 Predicted protein3628e-033
Q0WX00 Putative uncharacterized protein At1g037703483e-031
B9FKY2 Putative uncharacterized protein3261e-028
B8AZJ8 Putative uncharacterized protein3242e-028

Arabidopsis top hits (Blast detail)Scoree value
AT5G44280.1 RING1A (RING 1A); protein binding / zinc ion binding4621e-046
AT1G03770.1 RING1B (RING 1B); protein binding / zinc ion binding3482e-033
AT5G44280.2 RING1A (RING 1A); protein binding / zinc ion binding2882e-026
AT5G03710.1 unknown protein1726e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members