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Information for unigene UN79008

FASTA Sequence
Unigene ID: UN79008Length: 665 SSR 
GGAAACCAAAACCCATCATAATCATAAAAGTCCATGACTAACTGAAACAAACCGTACAAATGAAAGGAGAAACATAGATATAAAAA
ACTAAGAAACAAAAAAAAAACTAATCTGAAGTGAGACTTTGGATACAAGCATAAATGCCTTTTGTCTCACTTTTATCCAGAATAGA
TACCAAATAACACAGAACTCATCTTAACCATTACTCTTCATCATCTTCGCTGCCTTTGCTTTTCTTCTTCTTCTCCTTCTTTTTCT
TCTTCTCACTCTTCTCCGCTGAAGCAGCTTCATCTGTCTCCTTGCTCTTCTTTTTCTTCTTCTCACTCTTGTCTGCTGCTGATTCA
TCTTCATCTGTCTCCTTGCTCTTCTTCTTCTTCTTCTTCTTTTCTGACTTTGGCGTTGCTAGCTCTTCCTTATCCTCCTCTTTGTC
CTTCTTTTTCTTCTTCTCAGACTTGGCTTCTTCTTCTTCGTCTTTCCCCTCTGCCTTGTCCTTCTTCTTCTTGGAAGACTTGACCT
TCTCCCCAACCTCACCTTCAACATCTTTGGTTTTAGCTTTCTTGGTCGACACAGGAGCAGGGCTGTCGCTGCTATCATCACGCTTA
TGCTTACGCTTGCTCACTTCTCCATTGTCAGCCTCAACCTTCTCCACAACAGCTGCAACCTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191274 H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana]3566e-032
XP_002878134 hypothetical protein ARALYDRAFT_486159 [Arabidopsis lyrata subsp. lyrata]3503e-031
AAK83589 AT3g57150/F24I3_230 [Arabidopsis thaliana]3413e-030
XP_001311347 hypothetical protein [Trichomonas vaginalis G3]2643e-021
XP_002637418 Hypothetical protein CBG19125 [Caenorhabditis briggsae]2625e-021

Swiss-Prot top hits (Blast detail)Scoree value
Q9LD90 H/ACA ribonucleoprotein complex subunit 43563e-033
Q55FI4 Nucleolar protein 582651e-022
A5E4P1 Protein PXR12273e-018
Q54T81 Probable H/ACA ribonucleoprotein complex subunit 42254e-018
P36044 Protein MNN42032e-015

TrEMBL top hits (Blast detail)Scoree value
C0SVF3 Putative uncharacterized protein At3g57150 (Fragment)3564e-032
A2F9I8 Putative uncharacterized protein2642e-021
Q18401 Putative uncharacterized protein2571e-020
Q9LGZ9 Genomic DNA, chromosome 3, BAC clone:F1D92321e-017

Arabidopsis top hits (Blast detail)Scoree value
AT3G57150.1 NAP57 (Arabidopsis thaliana homologue of NAP57); pseudouridine synthase3563e-034
AT1G56660.1 unknown protein2013e-016
AT3G28770.1 unknown protein1914e-015
AT3G05060.1 SAR DNA-binding protein, putative1799e-014
AT2G18540.1 cupin family protein1645e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

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