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Information for unigene UN79102

FASTA Sequence
Unigene ID: UN79102Length: 671 SSR 
GGGCCAGAGCCATGGCTTCCCTTTCAATCACTTCCTCTTCGACAATCATCAATTCTAGAGCTTCTCCTCTTCCTAGACAAGCTTCC
ACCTCTTCTCCGTCGTGTATTTCCCTTCCGATGCTTCCTCCTCAGCCGGTTCAGTCCACTGCTTACTGTCGGAAGATTGCGAGGAA
CGTTCTGACAAGAGCTACCGAAGTTGAAGCTTCGGTCACTGCCGACGCTGACACTACAGAGTTGCCAGAAATCGTCAAGCGCTCAA
GAAGCTTGGGAGAAAGTGGAGGACAAGTATGCAATTAGTTCTCTCGCATTTGCTGCTTTGTTGGCTCTTTGGGGTTCTACTGGCCT
CATCTCGGCAATCGACAGGCTTCCATTGTTTCCAGGTGTTTTTGAACTTGTAGGCATTGGTTACACTGGGTGGTTTGCTTACAAGA
ATCTGATCTTCAAACCAGACAGGGAGGTGCTGTTTCAGAAGATCAAAGAATGAGAGCAGCTGAATCGAAGAATCTAACACATGTCT
ATGTCTCTCTGTGCTCCTTGTAGCTTAATATACCATGCGTCTTATATCAGTGTTGTAGATTCCATCATCTCTCTCTCTCTGCTCTC
CTTGTAGCTCAAATATCATCCATTTTATGTTGTAAATTCTTCAAGACTATGCAATGATGAGATATTTCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880267 hypothetical protein ARALYDRAFT_483848 [Arabidopsis lyrata subsp. lyrata]3423e-030
NP_566086 thylakoid membrane phosphoprotein [Arabidopsis thaliana]3396e-030
AAM63765 unknown [Arabidopsis thaliana]3352e-029
ABK95200 unknown [Populus trichocarpa]3243e-028
XP_002320236 predicted protein [Populus trichocarpa]3243e-028

Swiss-Prot top hits (Blast detail)Scoree value
Q8LCA1 Thylakoid membrane phosphoprotein 14 kDa, chloroplastic3393e-031
O04616 Uncharacterized protein At4g01150, chloroplastic1897e-014

TrEMBL top hits (Blast detail)Scoree value
A9PFP7 Putative uncharacterized protein3242e-028
B9I954 Predicted protein3242e-028
Q2HTB6 Putative uncharacterized protein3171e-027
A5C9J2 Putative uncharacterized protein3134e-027
A9PJN6 Putative uncharacterized protein3082e-026

Arabidopsis top hits (Blast detail)Scoree value
AT2G46820.1 PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding3393e-032
AT2G46820.2 PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding3393e-032
AT1G52220.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding (TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species: Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).2041e-016
AT1G52220.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding (TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species: Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).1961e-015
AT4G01150.1 unknown protein1896e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members