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Information for unigene UN79148
| FASTA Sequence |
| Unigene ID: UN79148 | Length: 831 |
SSR | | CGGTTCTGATCACTTTCTAGGTTCTCTTAGTCTGTGATTTGAAATGATTACATTTGAACCACAAGAAAGTCTTACCAAAAGTTCTG
TTAAATAACGGTTTAATTCACCTCAAAACTTAACAGACAATAAGGAAACAAATGCATGCTGTCACCAAAGACTCAAACTAACTACA
AAGCACCACGGCAACAAAACAGAGACTGCAATGGAAACCACCATTTGTCTGTATCCATCACTGCTCGAAGAAGGTGAAGCCATGGG
GGAATCAATGGCAGTTATGTTTCCCGTGATATTACCCGCCATTGTTCTGTTCATTCCATCAGTAGATGGAGCAATCATGTAGAGAC
AGTTACCATAGCTAGGGTCCTTGTCAACTTCAACGCTGACTCCTCCGAAGCTGCAATCTAAGCTACTCGCTCCGCTTTGCTGGTAA
TAAGTGTTGAACGCATACGATGCGTGTGAAAAAACAGTATCTGGCTCAAAGCAAGGCTGGTTTGGTTGAACAGCGGAACAATCAAC
GTTTCCAGGACCACAAGCCCAGTCCAATGCACTCTGCAGCTCCGTCACTGAAGCTTGGGATGAAGCAACACACCATTTCCTGGTTC
CTCCTCCTCCTCCTCCAATGACCACAGTTGAGTTACCTGGACTTGAACTTGGACTCGGACTCGTTGTACCTGTGCTTGAATTTGAT
GGAGAAACAGGAACAGTGCTTTCCCCAGTGAAGTCTAAAGCGTAAACACTTGTTCCATTCGCGTAGAACATTCCCCAGTTTCTCTC
AGATTCTATCCCAGGCTTCCTGTTCTCATTGAACAACGAGAACAAGTACACATCAAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAB79694 beta-1, 3-glucanase-like protein [Arabidopsis thaliana] | 1026 | 2e-109 |
| NP_849556 glucan endo-1,3-beta-glucosidase 12 [Arabidopsis thaliana] | 1026 | 2e-109 |
| XP_002867412 glycosyl hydrolase family 17 protein [Arabidopsis lyrata subsp. lyrata] | 1025 | 2e-109 |
| NP_567828 glucan endo-1,3-beta-glucosidase 12 [Arabidopsis thaliana] | 759 | 2e-078 |
| XP_002283473 PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] | 550 | 3e-054 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8VYE5 Glucan endo-1,3-beta-glucosidase 12 | 1026 | 9e-111 |
| Q9FJU9 Glucan endo-1,3-beta-glucosidase 13 | 377 | 2e-035 |
| P52409 Glucan endo-1,3-beta-glucosidase | 328 | 7e-030 |
| Q9ZU91 Glucan endo-1,3-beta-glucosidase 3 | 264 | 2e-022 |
| O65399 Glucan endo-1,3-beta-glucosidase 1 | 257 | 1e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RKF7 Glucan endo-1,3-beta-glucosidase, putative | 412 | 2e-038 |
| Q1WAK1 Beta-1,3-glucanase | 395 | 2e-036 |
| Q1WAK0 Beta-1,3-glucanase | 394 | 3e-036 |
| B9N5H5 Predicted protein | 376 | 3e-034 |
| B8A9G9 Putative uncharacterized protein | 371 | 1e-033 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G29360.1 glycosyl hydrolase family 17 protein | 1027 | 6e-112 |
| AT4G29360.2 glycosyl hydrolase family 17 protein | 759 | 7e-081 |
| AT5G56590.1 glycosyl hydrolase family 17 protein | 377 | 1e-036 |
| AT2G05790.1 glycosyl hydrolase family 17 protein | 336 | 8e-032 |
| AT4G05430.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-related (TAIR:AT1G09460.1); Has 776 Blast hits to 740 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 770; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | 272 | 2e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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