 |
Information for unigene UN79221
| FASTA Sequence |
| Unigene ID: UN79221 | Length: 635 |
SSR | | GGTGTCTACTGTCTCTATTTTTCCTTGTATGTTGTTTATAATGAAAACCAACAACAAATTATTTTGTGAAACGAGTTGTACAAACA
CAAAATCCTACAAATGGAATGTAATGAAATTGAAACATTCTCGTCATGTGATGACGACGTCTGCTGTATATATAGAGAGAGAGAGA
GGGACCTTTTCTTTATCCTCACTTGTTTCTGGTAATGACTCTATGCGTCAAGTCAATAAGTGCCCGCCTCGATCTTTTGACATCTT
CATCGTCTGTTTCAGGTAGAGACCCAATCGCTGCTGCTGCGAGATTAGCATGTTCCATAGCTAACTCTCTTGTCCTTTGTATTCCA
TTACTCTTCCCAAGATACTCTAAAGCAATGTCAACGTTCGTTGGATCTTTTTCAAGTTGACCAACAACTTTGCGTAGTTGTGGAAA
CTCCTCCATGGCAAACAGGATTGGAACTGTTATGATCCCGTGGCAGATGTCTGATAAAGATCCCTTTCCTAGAGATGTAGATGTGC
CAGTGAAGTCAAGAACGTCGTCTATCAATTGGAATGCCAAGCCCAGATTCTTCCCGTATTCAAAAGCTAACATGGCAACTTCTGCT
GATTGTCCAGCGAGTAATGCAACTGCCTTGCAG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAC16849 geranyl diphosphate synthase [Arabidopsis thaliana] | 657 | 7e-067 |
| NP_850234 geranyl diphosphate synthase 1 [Arabidopsis thaliana] | 657 | 7e-067 |
| AAC26705 putative trans-prenyltransferase [Arabidopsis thaliana] | 657 | 7e-067 |
| AAM13005 putative trans-prenyltransferase [Arabidopsis thaliana] | 657 | 7e-067 |
| NP_001031483 geranyl diphosphate synthase 1 [Arabidopsis thaliana] | 657 | 7e-067 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54VJ9 Decaprenyl-diphosphate synthase | 278 | 3e-024 |
| P31171 Prenyl transferase | 256 | 1e-021 |
| Q7S565 Probable hexaprenyl pyrophosphate synthase, mitochondrial | 255 | 1e-021 |
| Q33DR2 Decaprenyl-diphosphate synthase subunit 1 | 255 | 1e-021 |
| Q5T2R2 Decaprenyl-diphosphate synthase subunit 1 | 253 | 2e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O64684 Putative trans-prenyltransferase | 657 | 5e-067 |
| Q2V428 Putative uncharacterized protein At2g34630.1 | 657 | 5e-067 |
| Q5HZ00 At2g34630 | 657 | 5e-067 |
| Q8RWM1 Putative trans-prenyltransferase | 657 | 5e-067 |
| Q9FT89 Geranyl diphosphate synthase | 657 | 5e-067 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G34630.1 geranyl diphosphate synthase, putative / GPPS, putative / dimethylallyltransferase, putative / prenyl transferase, putative | 658 | 2e-069 |
| AT2G34630.2 geranyl diphosphate synthase, putative / GPPS, putative / dimethylallyltransferase, putative / prenyl transferase, putative | 658 | 2e-069 |
| AT1G17050.1 SPS2 (Solanesyl diphosphate synthase 2); trans-octaprenyltranstransferase | 242 | 4e-021 |
| AT1G78510.1 SPS1 (solanesyl diphosphate synthase 1); trans-octaprenyltranstransferase | 230 | 1e-019 |
| AT1G78510.2 SPS1 (solanesyl diphosphate synthase 1); trans-octaprenyltranstransferase | 230 | 1e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
