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Information for unigene UN79239

FASTA Sequence
Unigene ID: UN79239Length: 767 SSR 
GACCAGAAACAATACTTTATTGCAGAAATATATGGTTTACGTTAACATACAAAGATCTCTCTCTCTCATTGTAAAATAAACTGATC
CAAATCCATTTTTGCGGGCAGCCATTGGAAACCACTCATTCTTTTGCTCTATAAGGTCTACACATTTGTATCTGAGATTGTTCTTG
TTTGAAACGTTTTGAGCATCTTCAGACTAAGAAGATTCAACGAGAGGAAGTTGATACTCATCTGGTTTTAGTGCCAAAGCGAAATC
AGGAAGCGTTGGTGCCGTCTCCATGATTTTTTCATAAGAGTATAGATCACGGTTTATCCTGACTTTACTCGATGTATCTTTCGGGA
TTTTCTCTGTTAGATATTTCATTGTCCCAAAAAGCGGTGGTGTCCTGGAAGTAGGTGAAGAGGCGTTGAAAGCTTCGGATGCTTTC
TTACTTTCTTTGAAACACTCATCTGCGGCTTGTAAAGCAGCAACTGCCATGCCATGTGACTTCTCTGTGTTTCCTTCATCAAGAAT
CAAACCGTGATAGTAGTAAGCCGCAGCCTTAGCTTCAAGATACTTCCACTTAACGAAGAGTCTATGCTTCTCTCCCCAACCATTTG
CCAATGGAAGATTCATTAAATTATCTTGTGCCTGCTGCCAATATTTAACCATTTCACATGAAAGTCTTCGTTTGACTGCAAGAGTG
GCCTTAGAACTATCAATTGCCATGCCAAGTTGGATATCAACACCCTGGCCAAGTGCTTGCAAGCAAAGAGCCCGTAGAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892974 hypothetical protein ARALYDRAFT_889205 [Arabidopsis lyrata subsp. lyrata]9553e-101
NP_173236 Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]9526e-101
AAZ23936 At1g17940 [Arabidopsis thaliana]9518e-101
XP_002888928 hypothetical protein ARALYDRAFT_895200 [Arabidopsis lyrata subsp. lyrata]9491e-100
NP_177482 Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]9364e-099

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LMT6 At1g179409524e-101
Q494N2 At1g179409516e-101
Q9FX34 At1g733909363e-099
B9S0R0 Putative uncharacterized protein8772e-092
A9PHX3 Predicted protein8736e-092

Arabidopsis top hits (Blast detail)Scoree value
AT1G17940.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73390.3); Has 75 Blast hits to 75 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 22; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).9532e-103
AT1G73390.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17940.1); Has 95 Blast hits to 95 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 23; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).9362e-101
AT1G73390.2 FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17940.1); Has 95 Blast hits to 95 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 23; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).9362e-101
AT1G73390.3 FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17940.1); Has 95 Blast hits to 95 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 23; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).9362e-101
AT1G73390.4 unknown protein6314e-066

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members