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Information for unigene UN79328
FASTA Sequence |
Unigene ID: UN79328 | Length: 500 |
SSR | | GGGGGATGATGAGGGAGTGGTGGCGGAGGATGATGATGTTGTGGTTTTGGGATCTATTGCTCTGTCTATGGAGTTTGGGAAGAGGT
TTTATGAGATGGGTTCTTCTCCTGATTGCCATCAGGGGAATAGGAAAGTGATATTTGCGCTTCATAAAGAGTTTTTGCAGTTGGAG
AAGGATATGTTGAGCTCTGGTGTTGTGGTTTCTATCACTGGAGCTTCTCGGGAGAAGGATGAAGTGCCTGAGCTGGTTCCTATGAC
TGTTGAGGCAGTTGTTTCTGAGTCTAAGGAGGTTGTGCCAATGGGTCTTCTTCGAAGAAGAAGAAGAAGAGTTTGAAGAAGTGTTC
AAGTTCTAAGAAGAAGGGAGCTGATGTTGTTGTCAGTCATGGTGAGAAAGATGAGTCTGTTGACGAGACTATGATATCAGATCTCA
GAGAGGAGTTTGAGAAGATTGCATCCGAAATGGGTCCACTGAAAGATGAGGTTGCAAGTGTCTGTGAAGA
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GenBank top hits (Blast detail) | Score | e value |
NP_197560 uncharacterized protein [Arabidopsis thaliana] | 335 | 4e-030 |
XP_002874005 hypothetical protein ARALYDRAFT_910101 [Arabidopsis lyrata subsp. lyrata] | 323 | 1e-028 |
XP_002318342 predicted protein [Populus trichocarpa] | 232 | 4e-018 |
XP_002528509 nnp-1 protein, putative [Ricinus communis] | 218 | 2e-016 |
CAN72961 hypothetical protein VITISV_016489 [Vitis vinifera] | 214 | 5e-016 |
Swiss-Prot top hits | Score | e value |
No hits found | | |
TrEMBL top hits (Blast detail) | Score | e value |
Q8RY12 AT5g20600/F7C8_190 | 335 | 5e-030 |
B9I4Z2 Predicted protein | 232 | 5e-018 |
B9SR90 Nnp-1 protein, putative | 218 | 2e-016 |
A5C227 Putative uncharacterized protein | 214 | 6e-016 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G20600.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52 (InterPro:IPR010301); Has 444 Blast hits to 431 proteins in 151 species: Archae - 0; Bacteria - 10; Metazoa - 196; Fungi - 114; Plants - 27; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). | 335 | 5e-032 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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Unigene Members | |
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