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Information for unigene UN79328

FASTA Sequence
Unigene ID: UN79328Length: 500 SSR 
GGGGGATGATGAGGGAGTGGTGGCGGAGGATGATGATGTTGTGGTTTTGGGATCTATTGCTCTGTCTATGGAGTTTGGGAAGAGGT
TTTATGAGATGGGTTCTTCTCCTGATTGCCATCAGGGGAATAGGAAAGTGATATTTGCGCTTCATAAAGAGTTTTTGCAGTTGGAG
AAGGATATGTTGAGCTCTGGTGTTGTGGTTTCTATCACTGGAGCTTCTCGGGAGAAGGATGAAGTGCCTGAGCTGGTTCCTATGAC
TGTTGAGGCAGTTGTTTCTGAGTCTAAGGAGGTTGTGCCAATGGGTCTTCTTCGAAGAAGAAGAAGAAGAGTTTGAAGAAGTGTTC
AAGTTCTAAGAAGAAGGGAGCTGATGTTGTTGTCAGTCATGGTGAGAAAGATGAGTCTGTTGACGAGACTATGATATCAGATCTCA
GAGAGGAGTTTGAGAAGATTGCATCCGAAATGGGTCCACTGAAAGATGAGGTTGCAAGTGTCTGTGAAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197560 uncharacterized protein [Arabidopsis thaliana]3354e-030
XP_002874005 hypothetical protein ARALYDRAFT_910101 [Arabidopsis lyrata subsp. lyrata]3231e-028
XP_002318342 predicted protein [Populus trichocarpa]2324e-018
XP_002528509 nnp-1 protein, putative [Ricinus communis]2182e-016
CAN72961 hypothetical protein VITISV_016489 [Vitis vinifera]2145e-016

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8RY12 AT5g20600/F7C8_1903355e-030
B9I4Z2 Predicted protein2325e-018
B9SR90 Nnp-1 protein, putative2182e-016
A5C227 Putative uncharacterized protein2146e-016

Arabidopsis top hits (Blast detail)Scoree value
AT5G20600.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52 (InterPro:IPR010301); Has 444 Blast hits to 431 proteins in 151 species: Archae - 0; Bacteria - 10; Metazoa - 196; Fungi - 114; Plants - 27; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink).3355e-032

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members