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Information for unigene UN79349

FASTA Sequence
Unigene ID: UN79349Length: 756 SSR 
GGACACAGAGAGAGAGAGAGAAACAAAGTGTGAACTCAGATTCATCGCCGGAGAACCCCCTCCCGAAGCGATGGGAATAAGTAACA
AGCTCCGGCTGAGTAGCCGTATGCTCCACCGGAGAATACTATACTCATCCGCCAGATCCTTCACCACGACGGAAGGTCACCGTCCC
ACCATCGTCCACAAACGAAGCCTCGACATCCTCCACGACCCCTGGTTCAACAAGGGGACAGCGTTTACGATGACGGAGCGAGATCG
TCTCGATCTAAGGGGACTGCTTCCGCCTAGTGTCATGGACTCTGACCAGCAAATTCAGCGTTTCATGACTGACCTGAAGAGGCTGG
AGGAGCAAGCGAGGGATGGACCTTCTGATCCCAATGCTCTCGCTAAATGGCGGATTCTTAACCGCTTGCATGACCGTAATGAGACC
ATGTACTATAAGGTTTTGATTGCCAATATTGAGGAATATGCGCCAATAGTTTACACGCCTACGGTCGGTCTTGTCTACCGAATGTT
TAACGATGATGTCCAGGGGACAGCAGGGGTTGCGATTGCTGGTCTTCTTGGAGCTGTTAGAGCACAGGGGCGGCCTATGCTTGATT
TTCCAAAGATGAAGATCGTTGTTGCTGGCGCTGGAAGTGCGGGAATTGGGGTTTTAAATACTGCAAGGAAGACAATGGCACGGATG
TTGGGAAATACTGAAACTGCGTTTGAAGTGCACAAAGTCAATTTGGGTGGTTGATGCTCAGGCCTTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002883801 hypothetical protein ARALYDRAFT_480310 [Arabidopsis lyrata subsp. lyrata]6937e-071
NP_178980 NAD-dependent malic enzyme 1 [Arabidopsis thaliana]6847e-070
XP_002302483 predicted protein [Populus trichocarpa]6202e-062
XP_002526507 malic enzyme, putative [Ricinus communis]6174e-062
XP_002326881 predicted protein [Populus trichocarpa]6068e-061

Swiss-Prot top hits (Blast detail)Scoree value
P37221 NAD-dependent malic enzyme 62 kDa isoform, mitochondrial5795e-059
P37224 NAD-dependent malic enzyme 65 kDa isoform, mitochondrial5052e-050
P37225 NAD-dependent malic enzyme 59 kDa isoform, mitochondrial4083e-039
P78715 Malic enzyme, hydrogenosomal1379e-008
O34389 Probable NAD-dependent malic enzyme 31271e-006

TrEMBL top hits (Blast detail)Scoree value
Q9SIU0 Malic enzyme6845e-070
B9GP43 Malic enzyme6201e-062
B9SKH7 Malic enzyme6173e-062
B9MVC4 Malic enzyme6066e-061
B4FAR3 Malic enzyme5261e-051

Arabidopsis top hits (Blast detail)Scoree value
AT2G13560.1 malate oxidoreductase, putative6843e-072
AT4G00570.1 malate oxidoreductase, putative4003e-039
AT2G19900.1 ATNADP-ME1 (NADP-malic enzyme 1); malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor1271e-007
AT1G79750.1 ATNADP-ME4 (NADP-malic enzyme 4); malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor1172e-006
AT5G11670.1 ATNADP-ME2 (NADP-malic enzyme 2); malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor1162e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

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