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Information for unigene UN79374

FASTA Sequence
Unigene ID: UN79374Length: 667 SSR 
GGGCGCAGAAAGAAAGAGAGAGAGAGAATAATAATGTATTCGACGAAGCTTCTGGAGAAATTGGAGCTATAAACCTGGTAAATGGG
GAGAGAACCAGAGGACAAACACATGGATAAGAAGCTAAACAGCTCTACGGGATCTTCGCAGCCTGCAGAGGTTAAGGAATGTACTG
ATCACAACTCGGTTGCAGATGACGGATCTGGATCACATACATCTTCTGTCCAAAGGAAGAAGCTAAACACACCTCCTCAGCCGCAT
AAAACTCGTGGTGGTGTTAATTACACTGTTCCAAAGCCATTCTCTCTGTCGGCTGAAAAGCCTTCTGCTTCCTCCTCCTCAGTCTG
CGCAAGAGCAGGAGGAGTTGATAGTCATAATAATAATAATAACTCACCTGGAAATGCTGTTAGCCGCAACTCCTCTTCTGGTTCAA
GAAGTTCACAGCCAAACTCGCCTATGCCAGCGAGGAAGACAGTGAAGCACCGTGACGACGAAGATACCTTTTCTGTTGCTTCCTCA
TCAGCAACATCTGTAAGAACTATTAAACCCAAGGTAACCATTGAGTTGCTCCTACGTTTAGTAGCACATCGCGGTTGGAGAGACGC
AAAGAGTTTTACAAGAAGCTAGAGGAGAAACAGAAAGCACTTGAGGAAGAGAAGAGAGAAAACGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002894583 hypothetical protein ARALYDRAFT_337736 [Arabidopsis lyrata subsp. lyrata]1926e-013
NP_564659 TPX2 (targeting protein for Xklp2) protein family [Arabidopsis thaliana]1603e-009
AAM62494 unknown [Arabidopsis thaliana]1603e-009

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8LES4 Putative uncharacterized protein1602e-009
Q9ASW8 At1g54460/F20D21_281602e-009

Arabidopsis top hits (Blast detail)Scoree value
AT1G54460.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WDL1 (TAIR:AT3G04630.3); Has 393 Blast hits to 375 proteins in 76 species: Archae - 0; Bacteria - 3; Metazoa - 143; Fungi - 38; Plants - 160; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).1871e-014
AT5G28646.1 WVD21125e-006
AT5G28646.2 WVD21125e-006
AT3G04630.1 WDL11117e-006
AT3G23090.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, leaf apex, hypocotyl, flower, root; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WDL1 (TAIR:AT3G04630.3); Has 483 Blast hits to 450 proteins in 87 species: Archae - 2; Bacteria - 15; Metazoa - 188; Fungi - 17; Plants - 148; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).1117e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members