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Information for unigene UN79401

FASTA Sequence
Unigene ID: UN79401Length: 613 SSR 
GAAGGAGATCTTCCCCTGAAGGCAGACCTGGCAACGCATCTCCTGCTGTTCAGGATGAGTTCAATGAGAGGGAGCTTACAGGGCTT
AAAGCGGTGGCCAAGTGTGTGGAAGAGCATAACCTGGAAGAGCAGTACCCAGTTGAGCCACTTCAAAAGCGAACTCTCCAGCTGGA
GAAGGCCAAAGCAGAGAAAAAGAGAGCAACAGAACCCACAAAGCCTCAGACAAAGCGACCACGTGGTGCTCAACCTCGAGTCACTG
ACAACAACAACAACAACAATAACAACAAGACAGGATATGGTAGAGTCATCCCTGAGAGGTATCCGCAGTATGTGTATGACAACAGA
CCTTTCCTTAACGGCCCAATCATGGCGGCACAAGCTCCTCCACCTCCTCAGACTTACACTTTCAGTCCCGCTGCTGCTGCTCACGG
TAACTTCTACGGGAACTGCTATCAGTACCAGGCTCCTCCTCCTCCTTACTTTCACTAGTGACCAAAAAAAGGTGATGGTGAATGTG
ACTGTGACTCTCTCTCTCTCTTTCCTATGGTGTTAACTTGTGGCAGCTCTTTAACCCCTCCTCTCCTACTAGTCGTTTCCCTTTCA
ATGTTGTTGTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850923 FRIGIDA-like protein [Arabidopsis thaliana]7581e-078
AAM96992 putative protein [Arabidopsis thaliana]7543e-078
XP_002527289 conserved hypothetical protein [Ricinus communis]4093e-038
BAA96959 unnamed protein product [Arabidopsis thaliana]4084e-038
ABK94872 unknown [Populus trichocarpa]4084e-038

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q67ZB3 Putative uncharacterized protein At5g483907588e-079
Q8L7D6 Putative uncharacterized protein At5g483907542e-078
B9SMS0 Putative uncharacterized protein4092e-038
A9PER9 Putative uncharacterized protein4083e-038
B9GNI0 Predicted protein4083e-038

Arabidopsis top hits (Blast detail)Scoree value
AT5G48385.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G22440.1); Has 987 Blast hits to 921 proteins in 78 species: Archae - 0; Bacteria - 16; Metazoa - 58; Fungi - 7; Plants - 873; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).7594e-081
AT1G31814.1 FRL2 (FRIGIDA LIKE 2)1582e-011
AT3G22440.1 hydroxyproline-rich glycoprotein family protein1313e-008
AT4G14900.1 hydroxyproline-rich glycoprotein family protein1279e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members