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Information for unigene UN79403

FASTA Sequence
Unigene ID: UN79403Length: 821 SSR 
GGACAGATGTCTCAACCTCTTTCTTCTCTCTGTCCACTCTTCTCTCTCTCTCTCTCTCTCCTCTTCCTTGATCACAAGGTTCTTTG
TCTCAACCTCATTTTGTTGAGTCATTCATTAACCCCTCTGGAGAGGAGATTCAGACTAAGTTTATTGCACCGACACAACGTTGAAT
AGGTTTTTTGATCATAACAATGTCTGGAGACTCTCTGCTCGCTTCTAAACAAAGAAGTTCTTTATCCAGATTCTTTCAGACCAAAT
CAATTCATCTCTCGCAGGGTCTTGATTCTCCCAAGAACACCAAGTTTCACCACCTTTACAAGTTCGAACTCGAGCATGATGTGAAG
CGATTAAAAGATCAACTGCAAAAAGAGACTGCACTGCGCGCTCTATTGCTGAAAGCTTCTGATCAAAGCCACAAGATTGAGCTGTC
TCACACTTCTTCCCTTCCACGTAGCGTAATGTTCCTACAGCTTCTCTTACGTTCTAAAGCTTAAGCAATGAACCTTGTGATTTTGT
GAATGTTTCCTCGTTTCCACCAGGTTCAAGAACTTCTCTCCAGTATAGTAACTATGGAAGCTACAGTCTCTATGCTCGAAGAAGAG
ATCATGTCTCTACACTTCTTGCTGATTCAAGAACGGAACGAGAGAAAACTTGCTGAGTACAACCTCACGCATTCTCTGTCTCCACC
TAATGTTACAGATTTGGTTACGTTTACCAAAAGAAAGAAACATTACGCCGCAGATCTTCACAGAAGCAAGTGCCTAGTCTTTGCAA
GTGTGAGACGCTATGAGCTATCAAAGGAGATGATAGATGCATGAGAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892919 hypothetical protein ARALYDRAFT_471871 [Arabidopsis lyrata subsp. lyrata]3245e-028
NP_564005 uncharacterized protein [Arabidopsis thaliana]3102e-026
AAG09084 Unknown Protein [Arabidopsis thaliana]2197e-016
BAJ33667 unnamed protein product [Thellungiella halophila]1911e-012
XP_002884937 hypothetical protein ARALYDRAFT_318072 [Arabidopsis lyrata subsp. lyrata]1883e-012

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8L7U6 At1g16750/F19K19_263101e-026
Q9FWQ9 F17F16.4 protein2195e-016
Q56W79 AT3G13000 protein1837e-012
Q9LSH9 At3g130001837e-012
A2YGR9 Putative uncharacterized protein1496e-008

Arabidopsis top hits (Blast detail)Scoree value
AT1G16750.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: transcription factor (TAIR:AT3G13000.2); Has 420 Blast hits to 403 proteins in 70 species: Archae - 0; Bacteria - 56; Metazoa - 34; Fungi - 2; Plants - 297; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).3108e-029
AT3G13000.2 transcription factor1834e-014
AT3G13000.1 transcription factor1834e-014
AT4G33130.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: transcription factor (TAIR:AT3G13000.2); Has 77 Blast hits to 77 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1182e-006
AT4G33130.3 unknown protein1182e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members