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Information for unigene UN79461
| FASTA Sequence |
| Unigene ID: UN79461 | Length: 827 |
SSR | | GGGAGGATTAAATAAAGAAAGAAGGAAGACCGTAAGTGTAGAGAAGAGAGAGAGAGAGAGAGAGCCTCTGCATCTCGTGTTTGCTC
CGCCGTCAGGGGAAAAGAATATGGAAGCTGCTGTTCAGAGGTTCCACTACTTCTCACCATGTATTGATTGGAGAAATTTTGAAGGG
AAACCCCGTGGTTCTCTACGTTACTCTCAGCTAGGGCGAATCAAAGAGAATAAAAGGCTTATAGCTCATTTGCAACCTGACAAAAG
AAGGGATCTTCGACAAAGATCAGTTTCGGACAAGAACTCCTCAGCATTGTTGGAAACTGGAAATATTCTTCATTCTCCATTTGATG
AAGAACTTGTTTTGAAGAGAAAGGCTGAAGAGGTTAAACCGCATTTAAATGGACGATCTATGTATCTTGTTGGAATGATGGGTTCT
GGGAAGACGACAGTAGGAAAGATCATGGCAAAAGCACTTGGTTATTCATTCTTTGATTGTGATACATTGATCGAGGAGGCAATGAA
TGGAACTTCTGTAACTGAGATATTTGAGCATTTCGGTGAGAGTGTCTTCAGAGAGAAAGAGACCGAGGCACTAAAGAAGCTCTCTC
TGATGTACCACCAAGTTGTTGTGTCACAGGTGGGAGGTGCGGTTATAAGACCCATTAACTGGAAGTACATGCATAAAGTATTAGCA
TTTGGCTTGATGTTCCCTTAGAAGCTTAGCGCAAGAATTCTGCTGTGGGAACTAATTCAAGACATTGTTACATGATGATCAGTCAG
AGAGACCATACACAGTGGCTTTAAACGTCTTCACTATATGGGAGCACGTGTGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_195664 shikimate kinase 2 [Arabidopsis thaliana] | 751 | 1e-077 |
| XP_002866854 shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata] | 750 | 2e-077 |
| 3NWJ Chain A, Crystal Structure Of Shikimate Kinase From Arabidopsis Thaliana (Atsk2) | 630 | 2e-063 |
| XP_002878581 hypothetical protein ARALYDRAFT_320039 [Arabidopsis lyrata subsp. lyrata] | 628 | 3e-063 |
| AAD20411 putative shikimate kinase precursor [Arabidopsis thaliana] | 599 | 6e-060 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SJ05 Shikimate kinase, chloroplastic | 599 | 3e-061 |
| Q00497 Shikimate kinase, chloroplastic | 408 | 4e-039 |
| Q31PU5 Shikimate kinase | 251 | 6e-021 |
| Q5N4D3 Shikimate kinase | 251 | 6e-021 |
| Q3AH55 Shikimate kinase | 239 | 2e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GY88 At4g39540 | 751 | 1e-077 |
| A8MRG1 Uncharacterized protein At2g21940.3 | 599 | 4e-060 |
| Q9SVA4 Shikimate kinase-like protein | 516 | 2e-050 |
| A5AZY1 Putative uncharacterized protein | 445 | 3e-042 |
| B9VU88 Shikimate kinase | 445 | 3e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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