 |
Information for unigene UN79465
| FASTA Sequence |
| Unigene ID: UN79465 | Length: 573 |
SSR | | GGGGGGGTCATTCATATCAAACAGCCAACCAAAACCAAACATCTCTCTCTCCACCACTCAAAGTCTCTCTCTCTCTCGCTGCTTTC
AATGGCTTCCTTGCTCGATTCCGTCACCGTTACCCGCGTGTTTTCTCTTCCGATCACTTCGTCTGCTTCAAAGGTTCCGTCAGTTT
CCGCACGGCGGATTTCTCCCGTTCCGGAATTCAGAGGTTTGAAAGCTTCCCGACGGAGTTCGGTGACTCAGTCGGCTAGTCTTGGT
GAGAATCTCAGTTCCCGATTCGCTCGTGGTGGTAGAATCGTCTGCGAGGCTCAGGACACCACTGCCGCCGCCGTGGAAGTACCAAA
CATCTCTGATTCAGAATGGCAAACACAGGTTCTCGAGTCGGATGTACCAGTATTGGTCGAGTTTTGGGCACCGTGGTGTGGACCGT
GCCGTATGATTCACCCCATTGTTGACCAACTGGCCAAGGATTTCGCAGGCAAGTTCAAATTCTACAAAATCAACACCGACGAGAGC
CCAAACACAGCCAACCGTTACGGTATACGCAGCGTTCCTACGGTGATCATATTCAAA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188155 thioredoxin M4 [Arabidopsis thaliana] | 700 | 5e-072 |
| AAF15951 thioredoxin m4 [Arabidopsis thaliana] | 695 | 2e-071 |
| XP_002882937 hypothetical protein ARALYDRAFT_897824 [Arabidopsis lyrata subsp. lyrata] | 687 | 2e-070 |
| BAE99119 thioredoxin m4 [Arabidopsis thaliana] | 642 | 3e-065 |
| CBI20319 unnamed protein product [Vitis vinifera] | 429 | 1e-040 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SEU6 Thioredoxin M4, chloroplastic | 700 | 3e-073 |
| Q9SEU8 Thioredoxin M2, chloroplastic | 350 | 1e-032 |
| Q9XGS0 Thioredoxin M-type, chloroplastic | 346 | 3e-032 |
| O48737 Thioredoxin M1, chloroplastic | 340 | 2e-031 |
| P07591 Thioredoxin M-type, chloroplastic | 337 | 3e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PIT9 Putative uncharacterized protein | 422 | 6e-040 |
| B9HZV8 Thioredoxin m | 421 | 8e-040 |
| A7LNX7 Thioredoxin | 416 | 3e-039 |
| Q95AH9 Putative thioredoxin m2 | 410 | 2e-038 |
| B9S2L1 Thioredoxin m(Mitochondrial)-type, putative | 408 | 3e-038 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G15360.1 TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4); enzyme activator | 700 | 3e-074 |
| AT4G03520.1 ATHM2; enzyme activator | 350 | 1e-033 |
| AT1G03680.1 ATHM1; enzyme activator | 340 | 2e-032 |
| AT2G15570.2 thioredoxin M-type 3, chloroplast (TRX-M3) | 227 | 2e-019 |
| AT2G15570.1 thioredoxin M-type 3, chloroplast (TRX-M3) | 223 | 6e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
