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Information for unigene UN79563

FASTA Sequence
Unigene ID: UN79563Length: 707 SSR 
GGGGACTCTAAGGAGAGTGGCCTCTCTCTCTCTATCTATCTCTCGCCTCTCTACCCTAAGACACACTCACCCACTTCCTCCTCCTC
TTCCATAAACCTCTCTCTTCTCTCTCTCTCCTGCCATGAAAATCGCAGACACAAACTCCTCAGAAACCTCCTCCCATCTTGATGTC
TTCTGTGTCTTCCTGAGTTTTGTCCGAACGCTCTGAAAACTTTACTTGTGAGACCTCAAAAAATAAACGGATATTTATAGAAAACT
CATAAAAACAAAAAGATCAAACCCCATGGCTGAGAATCTCACTTGTGGAGAAACCAGCGATTCATGGATCACTGATGATGACGTCA
GCTGCGGCGGCGGCGGATTCATGAACGATGAACTTTTTAGTAAAGACCATAACTTTAACGTCAACGGATCAAACCCGATGATGGGA
GAAGAGAGAATCAGAGAGATGTTGGAGCGAGAGGCTGAGTTCTTGCCAGGACCTGATTACCTCAAGAGACTGCGTTCTGGGGACTG
GGAGTTGCGTGTTAGGAACCAAGCTCTGGATTGGATTCTAAAGGTTTGTGCTCATTACAGTTTTGGAACACTCTGCATATGTCTGT
CCATGAACTACTTGGATCGGTTCTTAACATCCTATCATTAGCAGCTAAAATGGAAGAATCAGATGTGCCTCAAACTGTTGAGTTAC
AGGTGGGAGATCCCAAGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880446 CYCD2_1 [Arabidopsis lyrata subsp. lyrata]3191e-027
S51651 cyclin delta-2 - Arabidopsis thaliana3083e-026
NP_179835 cyclin-D2-1 [Arabidopsis thaliana]3083e-026
NP_001189576 cyclin-D2-1 [Arabidopsis thaliana]3083e-026
BAF00198 putative cyclin D [Arabidopsis thaliana]3021e-025

Swiss-Prot top hits (Blast detail)Scoree value
P42752 Cyclin-D2-14316e-042
Q0WQN9 Cyclin-D4-22264e-018
Q8LGA1 Cyclin-D4-12122e-016
Q6YXH8 Cyclin-D4-11843e-013
Q4KYM5 Cyclin-D4-21719e-012

TrEMBL top hits (Blast detail)Scoree value
Q9ZRX9 Cyclin D2.1 protein2606e-021
B9SXI2 Cyclin d, putative2428e-019
A8Y908 D2/4-type cyclin2302e-017
B9H6X0 Predicted protein2302e-017
B9RJU5 Cyclin d, putative2266e-017

Arabidopsis top hits (Blast detail)Scoree value
AT2G22490.1 CYCD2;1 (Cyclin D2;1); cyclin-dependent protein kinase regulator/ protein binding4316e-043
AT5G10440.1 CYCD4;2 (cyclin d4;2); cyclin-dependent protein kinase2264e-019
AT5G65420.1 CYCD4;1 (CYCLIN D4;1); cyclin-dependent protein kinase regulator2122e-017
AT1G70210.1 CYCD1;1 (CYCLIN D1;1); cyclin-dependent protein kinase regulator1403e-009
AT3G50070.1 CYCD3;3 (CYCLIN D3;3); cyclin-dependent protein kinase1153e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members