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Information for unigene UN79682
| FASTA Sequence |
| Unigene ID: UN79682 | Length: 522 |
SSR | | GAAGTGGTTCAAGCAGTGTACCTTCTTCTTCTTCTTCGCCATTAGCCGGTAAAACAGTGGTTGTTATTGGTGCTGGTGGAGCAGGC
AAGGCACTTGCTTATGGTGCAAAAGAGAAGGGTGCCAAGGTTGTAATTGCTAATCGAACTTACGAACGAGCAGTAGAACTCGCAGA
AGCAATTGGAGGCAAAGCGTTATCTCTCACGGATTTAGATGACTTCCACCCAGAAGATGGCATGGTTTTGGCTAACACCACTTCTA
TGGGTATGCAACCAAATGTTGATGAAACTCCCATCTCCAAGCATGCATTGAAGCACTACGCACTGGTGTTTGATGCGGTTTATACA
CCAAGAATCACACGACTGTTACGGGAAGCAGAAGAATGCGGAGCAGTGACAGTGTCAGGCTCAGAGATGTTTGTGAGGCAGGCTTA
TGAGCAGTTTGAGATTTTCACCAGTTTGCCCGCTCCGAAGGAACTATGTTGGCAAATCATGTCAAAGTACTGAGAGACCTCACTCA
CTCTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884573 EMB3004/MEE32 [Arabidopsis lyrata subsp. lyrata] | 773 | 1e-080 |
| AAW63134 dehydroquinate dehydratase/shikimate dehydrogenase [Arabidopsis thaliana] | 754 | 2e-078 |
| NP_187286 Shikimate dehydrogenase [Arabidopsis thaliana] | 754 | 2e-078 |
| 2GPT Chain A, Crystal Structure Of Arabidopsis Dehydroquinate Dehydratase- Shikimate Dehydrogenase In Complex With Tartrate And Shikimate | 754 | 2e-078 |
| 2O7Q Chain A, Crystal Structure Of The A. Thaliana Dhq-Dehydroshikimate- Sdh-Shikimate-Nadp(H) | 754 | 2e-078 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SQT8 Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic | 754 | 1e-079 |
| Q18KS0 Shikimate dehydrogenase | 280 | 1e-024 |
| Q8THC3 Shikimate dehydrogenase | 275 | 4e-024 |
| B9LSZ3 Shikimate dehydrogenase | 274 | 6e-024 |
| Q3ITN9 Shikimate dehydrogenase | 271 | 1e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q30D00 Putative 3-dehydroquinate dehydratase/shikimate dehydrogenase | 634 | 1e-064 |
| B9HSF2 Dehydroquinate dehydratase/ shikimate dehydrogenase | 623 | 2e-063 |
| A7XEE1 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase (Fragment) | 617 | 1e-062 |
| B9RSY7 Shikimate dehydrogenase, putative | 617 | 1e-062 |
| O65917 Dehydroquinate dehydratase/shikimate:NADP oxidoreductase | 606 | 2e-061 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G06350.1 MEE32 (MATERNAL EFFECT EMBRYO ARREST 32); 3-dehydroquinate dehydratase/ NADP or NADPH binding / binding / catalytic/ shikimate 5-dehydrogenase | 755 | 1e-080 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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