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Information for unigene UN79709
| FASTA Sequence |
| Unigene ID: UN79709 | Length: 769 |
SSR | | GGGAAAATCCCCAAAAATTAGGGTTTCTTCTGCCCAATTGTATTCTTCTTCTTCTTCTTCTTCTACGACTATACACAACTGTCGCT
TGTCGAGGGTTCCGAATCACTTCTCTTTGCCAAGTTCTTCTCTGGATTTGTTCAATTTCCGCTTTTTAATGTTTGTTTCCCTTTGA
GCTATCTATCGATTACACAAGTTATCATCCTAGAAGACGAACTCGTCGTGAATTTTCCTCTGGTGTCGACTTGAGTTTTTGGAGAG
ATGCAATCGAACTCGGGAAGAGGAAATGAAGCGGAAGTCAATCACCAGCAGCCAATGATGTATGCAGAGCCTTGGTGGAAGAGCAA
CTCTTTTTGTGTCGAGAGGCCTTCTCTTGTTCCATCAAAGTCCTCCTTTTTGGAAGAGTGTCCGGACGGTTCGGAATCAAACGATG
TTCACTCTGCTGCATCTGAAGACGATGGCGCTTGCAAGGATTCACAAGCTGCAACTTCCTCCTCCCCTTCTGTAGATAACCATGGA
ATGGAAGGGAACATGCATGGTCAGCAACTTGTGCAACCACCAGAGCTTGTTGGACACTACATTGCTTGTATGCCAAATCCATATCA
CGATCCATATTATGGGGGAATGGTCGGAACATATGGACATCAGCAATTGGGTTTTCATCCATATCCTGGAATGCCTGGTGAAAGAA
CGGCACTACCGCTTGACACGACACAGAACCTGTTTATGTGATGCGAACGGTACAAGGATCTAAGCGACGAAAGCACGTGCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_850811 nuclear transcription factor Y subunit A-1 [Arabidopsis thaliana] | 550 | 3e-054 |
| XP_002873581 predicted protein [Arabidopsis lyrata subsp. lyrata] | 308 | 3e-026 |
| NP_568282 nuclear transcription factor Y subunit A-1 [Arabidopsis thaliana] | 300 | 3e-025 |
| NP_566670 nuclear transcription factor Y subunit A-9 [Arabidopsis thaliana] | 196 | 3e-013 |
| BAB01900 CCAAT-binding transcription factor B subunit [Arabidopsis thaliana] | 196 | 3e-013 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LXV5 Nuclear transcription factor Y subunit A-1 | 560 | 8e-057 |
| Q945M9 Nuclear transcription factor Y subunit A-9 | 196 | 1e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| B9DGV8 AT5G12840 protein | 550 | 2e-054 |
| Q1ECD3 At5g12840 | 300 | 2e-025 |
| B7ZWQ7 Putative uncharacterized protein (Fragment) | 188 | 2e-012 |
| B9RID0 Nuclear transcription factor Y subunit A-1, putative | 162 | 2e-009 |
| A5BU97 Putative uncharacterized protein | 157 | 7e-009 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G12840.1 NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1); transcription factor | 560 | 8e-058 |
| AT5G12840.3 NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1); transcription factor | 560 | 8e-058 |
| AT5G12840.2 NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1); transcription factor | 550 | 1e-056 |
| AT5G12840.4 NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1); transcription factor | 550 | 1e-056 |
| AT3G20910.1 NF-YA9 (NUCLEAR FACTOR Y, SUBUNIT A9); specific transcriptional repressor/ transcription factor | 196 | 1e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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