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Information for unigene UN79782
| FASTA Sequence |
| Unigene ID: UN79782 | Length: 732 |
SSR | | GGACACACTCCTCTCTCTCTCTCTCTCTCTTCAGATCAATAGCTGTGAGGAGGAGGAGAAGCAAGCAGCGTCGGAGATAAATGGCA
GGGTACAGAGTGGAAGACGACTACGATTACCTCTTCAAAGTCGTCCTCATAGGCGATTCCGGTGTAGGGAAATCGAATCTGCTCTC
CAGATTCACGAAAAACGAGTTCAATCTCGAGTCTAAATCCACCATTGGTGTCGAGTTCGCCACTCGTACCTTGAAAGTCGAAAAAA
AGGTCGTCAAGGCTCAGATTTGGGATACTGCTGGTCAAGAAAGGTACCGTGCCATCACTAGTGCATACTACCGTGGAGCCGTTGGG
GCACTCCTAGTATACGATACTACCCGCCGTGCAACTTTCGAGAACGTTGACCGGTGGTTGAAGGAGCTCAAGAACCACACAGACCC
TAACATCGTGGTGATGCTCGTCGGTAACAAATCTGACCTGCGCCATTTGCTAGCTGTTCCCACGGAAGATGGGAAGTCATATGCTG
AGCAGGAATCGCTTTGCTTCATGGAAACATCTGCCCTTGAATCCACCAACGTCGAGAACGCCTTTGCAGAGGTTTTGACTCAGATT
TACCGTATAACTAGCAAGAAGCAAATGGAAGCTGGTGAAGATGGGAACGGATCTGTTCCGAAAGTGAGAAGATCGAGTTAAAACGA
TGTCTCTGCTCTGAGAAACTCGGGTGCTGCCCAAATGAAGTCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_173136 Ras-related protein RABA1b [Arabidopsis thaliana] | 974 | 2e-103 |
| XP_002892930 hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp. lyrata] | 973 | 2e-103 |
| AAM63927 guanine nucleotide regulatory protein, putative [Arabidopsis thaliana] | 970 | 5e-103 |
| ACU23949 unknown [Glycine max] | 885 | 3e-093 |
| BAA02113 GTP-binding protein [Pisum sativum] | 883 | 6e-093 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39222 Ras-related protein RABA1b | 974 | 7e-105 |
| Q40194 Ras-related protein Rab11D | 848 | 3e-090 |
| P40393 Ras-related protein RIC2 | 848 | 3e-090 |
| Q9FK68 Ras-related protein RABA1c | 824 | 2e-087 |
| Q01111 Ras-related protein YPT3 | 803 | 5e-085 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WSQ7 Putative uncharacterized protein At1g16920 | 974 | 1e-103 |
| Q8LC05 Guanine nucleotide regulatory protein, putative | 970 | 3e-103 |
| C6TM07 Putative uncharacterized protein | 885 | 2e-093 |
| Q08150 GTP-binding protein | 883 | 4e-093 |
| Q7DLK8 Guanine nucleotide regulatory protein | 883 | 4e-093 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G16920.1 ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B); GTP binding | 974 | 7e-106 |
| AT4G18800.1 ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D); GTP binding | 857 | 3e-092 |
| AT5G45750.1 AtRABA1c (Arabidopsis Rab GTPase homolog A1c); GTP binding | 824 | 2e-088 |
| AT1G06400.1 ARA-2; GTP binding | 786 | 4e-084 |
| AT5G60860.1 AtRABA1f (Arabidopsis Rab GTPase homolog A1f); GTP binding | 784 | 8e-084 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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