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Information for unigene UN79822
| FASTA Sequence |
| Unigene ID: UN79822 | Length: 694 |
SSR | | GGACAGTCGATCTTCTGAAACCCCCAAAAAACTCTCCTCTCTCGTTTTCCAGGCGATCTCTCTCTCTCTCTCTCTCTCCGATTTTG
GCTATCGACATGGCGACTCCGATGGTAGAAGACACCTCAAGCTTCGAAGAGGATCAGCTCGCTTCCATGTCCACCGAAGACATCGT
CAGAGCTACTCGTCTCCTCGACAACGAGATTCGAATCCTCAAGGAAGACTCTCAAAGAACAAATCTAGAATGTGATTCTTACAAGG
AGAAGATTAAAGAGAATCAGGAGAAGATTAAACTCAACAAGCAGCTTCCTTACTTGGTCGGCAACATTGTAGAGATCTTGGAGATG
AATCCGGAAGATGATGCTGAAGAAGACGGTGCTAATATAGACCTTGACTCTCAAAGGAAGGGAAAGTGTGTTGTCTTGAAAACCTC
TACACGACAGACAATCTTTCTACCAGTTGTTGGTCTCGTGGACCCTGACAGTTTGAAGCCTGGGGACTTGGTTGGTGTTAACAAAG
ACAGTTACCTTATTTTGGATACCTTGCCATCCGAGTATGACTCTAGAGTTAAAGCCATGGAAGTCGATGAGAAACCAACCGAAGAT
TACAATGACATTGGAGGACTGGAGAAGCAGATCCAAGAGCTTGTGGAGGCAATTGTGCTTCCCATGACGCACAAGGAGCGTTTCGA
GAAGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAB21595 Tat binding protein like protein [Brassica rapa] | 1003 | 6e-107 |
| O23894 RecName: Full=26S protease regulatory subunit 6A homolog; AltName: Full=Tat-binding protein homolog 1; Short=TBP-1 | 999 | 2e-106 |
| NP_187204 regulatory particle triple-A ATPase 5A [Arabidopsis thaliana] | 999 | 2e-106 |
| AAD46145 19S proteasome regulatory complex subunit S6A [Arabidopsis thaliana] | 999 | 2e-106 |
| AAN15459 26S proteasome AAA-ATPase subunit RPT5a [Arabidopsis thaliana] | 999 | 2e-106 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O23894 26S protease regulatory subunit 6A homolog | 999 | 9e-108 |
| Q9SEI2 26S protease regulatory subunit 6A homolog A | 999 | 9e-108 |
| P54776 26S protease regulatory subunit 6A homolog | 911 | 1e-097 |
| O04019 26S protease regulatory subunit 6A homolog B | 900 | 3e-096 |
| P46465 26S protease regulatory subunit 6A homolog | 888 | 6e-095 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9AYS9 Tat binding protein like protein | 1003 | 4e-107 |
| B9RFB5 26S protease regulatory subunit 6a, putative | 941 | 7e-100 |
| B9N4I9 Predicted protein | 931 | 1e-098 |
| B9I7I1 Predicted protein | 930 | 1e-098 |
| A5AEY4 Putative uncharacterized protein | 928 | 2e-098 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G05530.1 RPT5A (REGULATORY PARTICLE TRIPLE-A ATPASE 5A); ATPase/ calmodulin binding | 999 | 8e-109 |
| AT1G09100.1 RPT5B (26S proteasome AAA-ATPase subunit RPT5B); ATPase/ calmodulin binding | 900 | 2e-097 |
| AT2G20140.1 26S protease regulatory complex subunit 4, putative | 173 | 5e-013 |
| AT4G29040.1 RPT2a (regulatory particle AAA-ATPase 2a); ATPase | 173 | 5e-013 |
| AT5G58290.1 RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3); ATPase | 168 | 2e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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