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Information for unigene UN79848

FASTA Sequence
Unigene ID: UN79848Length: 574 SSR 
GGGGATGGAAAACAGAAGCAGAAGCTTTAACTCAATCATCGTCAAAGCTGCTTGAAAGATGCGCAGCCTCACTCTAACTCTCAGAT
CCTCTTCCCTCCCATTATTCACCTTCACCTCCTCCTCCTCCTTCAGACGATTCCATTTCCTCAAGCCATGCTCTTCCCTCAAACAA
ACGAAGAAGAACCAACAGTCTCTCCGCCGTTCTCCGCCTCCTCCTTCCACCGCCCCTCCTCCCAAGAGTCTCCGATGGTTCTTCAA
TCCCAAATCCAGTAACGACGACGAAAACGACGACGCTAAATCCTCCAAAGCTGAGAGCGATGATGGATCAGGTGGGGATGATGCTG
CTATCAAGGGTACGATTCTGGACGGAGTTTTGTTGATTGGTACTGTTGGCGGATTCGCCGGCGTTGGATACTTCTACAGAGACCAG
ATCAATACCTTTCTCACTCAGTTCTCCACTTTCATCGAAAGTTATGGTCCGGCTGGGTATGCACTGTTCATTGCGGTCTATGCTGG
CCTTGAGATCCTAGCCATCCCGGCTCTCCCGTTGACCATGTCGCTGGTCTTCTCTTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564182 SNARE associated Golgi protein family [Arabidopsis thaliana]5787e-058
XP_002893250 hypothetical protein ARALYDRAFT_472530 [Arabidopsis lyrata subsp. lyrata]5662e-056
CAN68419 hypothetical protein VITISV_041846 [Vitis vinifera]4721e-045
XP_002525514 conserved hypothetical protein [Ricinus communis]4066e-038
XP_002327389 predicted protein [Populus trichocarpa]3771e-034

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O23137 At1g22850/F29G20_195785e-058
A5BXR4 Putative uncharacterized protein4721e-045
B9SHP5 Putative uncharacterized protein4065e-038
A9PH39 Predicted protein3771e-034
B8LQ12 Putative uncharacterized protein3528e-032

Arabidopsis top hits (Blast detail)Scoree value
AT1G22850.1 INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03260.1); Has 3098 Blast hits to 3098 proteins in 664 species: Archae - 6; Bacteria - 1614; Metazoa - 182; Fungi - 59; Plants - 145; Viruses - 0; Other Eukaryotes - 1092 (source: NCBI BLink).5784e-060

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members