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Information for unigene UN79854

FASTA Sequence
Unigene ID: UN79854Length: 612 SSR 
GATTCTCTTCACCTGCCTCGATCGATTTCCACCGTGTAAGCAGTCAGTCTCTCACATGGCGACCGAAACCAAAGAGGAGAAGATAC
CCGAAGCGGTGGAATCGGAAGATGGTGTTGTTGTTGCTAAGGAGACGGAGAAGAAAGAAGATGCTCCTGTAAGTGATGAAGACGGA
GACAGCGAGGAGGTGGAGGAGGAGGAGGAGGAAAAGATTGTCACAGGGACGCCCGTTACTACTGAGAGGCCAAAGAGGATAATAAA
GAAAGTAGAGCCTCACATTTTGCTTACTCCCTCTCGTTCGAGGAGCAAGCCCGTCTCTGTTCAGAAGGGTCGTGGAACACAGCTTA
AGGAGATTCCAAATGTGGCTTATAAACTATCCAAGAGGAAACCTGACGACAACCTTTTCTTGCTTCACACTATTCTTTACGCCAAG
AAAGGAAAGGTTCAGACGCTGAAGAAAAACATTGGTCAATTTTCGGGGTTTGTCTGGTCGGAGCAAGAGGAGGAGAAGCAAAGAGC
AAAAACAAAGGAGAAGATTGACAAGTGTGTCAAAGACAAGTTAATTGATTTCTGTGATGTGCTTGACATACCCATTAACAAAAGTA
ATGTGAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_190440 DEK domain-containing chromatin associated protein [Arabidopsis thaliana]5601e-055
BAF01711 hypothetical protein [Arabidopsis thaliana]5601e-055
AAM61476 unknown [Arabidopsis thaliana]5563e-055
XP_002875919 hypothetical protein ARALYDRAFT_485225 [Arabidopsis lyrata subsp. lyrata]5492e-054
NP_201160 DEK domain-containing chromatin associated protein [Arabidopsis thaliana]5017e-049

Swiss-Prot top hits (Blast detail)Scoree value
Q7TNV0 Protein DEK2272e-018
Q6AXS3 Protein DEK2112e-016
P35659 Protein DEK2102e-016

TrEMBL top hits (Blast detail)Scoree value
Q0WMA0 Putative uncharacterized protein At3g487105608e-056
Q9SMM8 At3g487105608e-056
Q8LFD2 Putative uncharacterized protein5562e-055
Q84JB7 Putative uncharacterized protein At5g635505015e-049
Q9FFQ8 Emb|CAB62360.15015e-049

Arabidopsis top hits (Blast detail)Scoree value
AT3G48710.1 EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63550.2); Has 48226 Blast hits to 25734 proteins in 1103 species: Archae - 54; Bacteria - 6881; Metazoa - 21026; Fungi - 4604; Plants - 1514; Viruses - 306; Other Eukaryotes - 13841 (source: NCBI BLink).5605e-058
AT5G63550.1 EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48710.1); Has 115795 Blast hits to 50006 proteins in 1760 species: Archae - 230; Bacteria - 10317; Metazoa - 57515; Fungi - 12631; Plants - 4292; Viruses - 1075; Other Eukaryotes - 29735 (source: NCBI BLink).5014e-051
AT5G63550.2 EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48710.1).5014e-051
AT4G26630.1 EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55660.1); Has 253164 Blast hits to 95130 proteins in 2571 species: Archae - 852; Bacteria - 27744; Metazoa - 108483; Fungi - 29060; Plants - 10256; Viruses - 1718; Other Eukaryotes - 75051 (source: NCBI BLink).2981e-027
AT4G26630.2 EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55660.1); Has 253164 Blast hits to 95130 proteins in 2571 species: Archae - 852; Bacteria - 27744; Metazoa - 108483; Fungi - 29060; Plants - 10256; Viruses - 1718; Other Eukaryotes - 75051 (source: NCBI BLink).2981e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members