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Information for unigene UN79883
| FASTA Sequence |
| Unigene ID: UN79883 | Length: 715 |
SSR | | GGACAACAAACACGTGAAATAATTTTGGTTTTGACAAAAAAATTACTAAACCAAACCAAACCAAACCAAACCTGCCACTACGAGAG
AGAGTTTTGAGTAAACCGGGTTTGTTAGTTGTTGATGTTGAAGGTGATGATGATGCAGAGGAGCCCAAGATCTCCGTCGTCGTCGT
CGTCGCAGCCGTATTTGTCAGCCTCCGTCACCGATCCAGTCAAATCAGGCAATGGCGTTCAAGCTTACATCTCTTACCGAGTCGTC
ACCAAGACGAACTTGCCGGAGTACCAAGGTGGACCGGAGAAGATTGTAATCAGACGGTACAGTGATTTCGTGTGGTTGAGGGATCG
GCTCTTTGAGAAGTACAAAGGCGTTTTCGTTCCTCCTCTCCCTGAGAAGAGTGCTGTTGAAAAATTCAGGTTTACTGCTGAGTTTA
TTGAAATGAGGCGAGCGGCATTGGATATATTTGTTAATCGGATAGCATTACACCCTGAGCTTCAGCAGAGCGAGGATCTTAGAACC
TTTTTGCAAGCTGATGAAGAGACTATGGAAAGATTCAGGTTTCAGGAAACTGGTATATTCAAGACGAAGCCTTCTGATCTTATGCA
AATGTTTTGGGATGTGCAATCAAAAGTTAGTGATGCTGTCCTCGGAAAGGAAAACCTGTCGAAGAAACTACTCCTGAATACGAGAA
GCTTAAACACTACGTTCTCGAGCTTGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAD29576 sorting nexin 1 [Brassica oleracea] | 775 | 2e-080 |
| XP_002873240 phox domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 771 | 5e-080 |
| NP_196232 sorting nexin 1 [Arabidopsis thaliana] | 760 | 1e-078 |
| XP_002282010 PREDICTED: hypothetical protein [Vitis vinifera] | 725 | 1e-074 |
| CBI30329 unnamed protein product [Vitis vinifera] | 725 | 1e-074 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q70YZ8 Sorting nexin 1 | 775 | 1e-080 |
| Q9FG38 At5g06140 | 760 | 7e-079 |
| C6TEZ3 Putative uncharacterized protein | 723 | 1e-074 |
| B9IIS7 Predicted protein | 717 | 7e-074 |
| B9SWH8 Sorting nexin 3, putative | 709 | 6e-073 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G06140.1 SNX1 (SORTING NEXIN 1); phosphoinositide binding / protein binding | 760 | 4e-081 |
| AT5G58440.1 SNX2a (SORTING NEXIN 2a); phosphoinositide binding | 259 | 5e-023 |
| AT5G07120.1 SNX2b (SORTING NEXIN 2b); phosphoinositide binding / protein binding | 250 | 6e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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