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Information for unigene UN79899

FASTA Sequence
Unigene ID: UN79899Length: 742 SSR 
GGAGAGTAGAGAGGACTTCCTTTGATCGGATTCTCTGGCCTTTCCTCGTCGGAGGTTCTTTATTCTAACTTGTGAGGAGCAACATA
GAGAGAGACAAAGATAATACTTGTTGGGGGGGGTTTTGTGTATCATGTCAAGTTTGCTATACTGCCGACGCTTTCTCTTGACATCT
TCTTCTTCTTCTGCTTCGATTCACTCATCTTCCATTTCGTCGTTTCTACTGAATAGTAGTATAAGAAGAAGAACATTTTGTTCTTC
AGCCTCCGACACGAAGAAAACAGAGGATGCCAAAAGAAAGAGACCACCACCTTTGAAATCCTTCACCGTAAACTATCTCGTGAACT
CATGTGGGTTGTCCTTGGAATCCGCCAAATCTCGGTCTAGATTCGTAAAGCTTTCATCTTCCAAGAGACCAGACTCTGTCCTCGCT
CTCCTCAAGAACCATGGCTTCACCTTCGAACAGATCACCAGAGTCGTCAAATCATTCCCTACTATCCTCATAGTCAACCCCGACGA
AGTTCTCTCGCCAAAGCTCTTGTTTTTCCGTTCGATCGGGCTATCCAGCGTTGACACAGCGAAACTGATATCAAACTGTCCCACCA
CGCTCTCCCTTAGCTTGCACAACAGGCTCATCCCTTGCTATGATTCCCTCAAGAGCATACTCGTGGAGAAGAGAGTATCCTCAAGT
GTTTGAGACGGGGTACTGGATCTTCACGTTGGACACTGTCAGTACTTGGCTGCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876694 hypothetical protein ARALYDRAFT_907868 [Arabidopsis lyrata subsp. lyrata]5395e-053
AAF80646 Contains similarity to F28O16.19 a putative translation initiation factor IF-2 gi|6143896 from Arabidopsis thaliana gb|AC010718. It is a member of Elongation factor Tu family. ESTs gb|AI994592 and gb|T20793 come from thias gene4884e-047
XP_002893155 hypothetical protein ARALYDRAFT_313019 [Arabidopsis lyrata subsp. lyrata]4713e-045
NP_173539 Mitochondrial transcription termination factor family protein [Arabidopsis thaliana]4671e-044
XP_002271867 PREDICTED: hypothetical protein [Vitis vinifera]3182e-027

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LPV0 T22I11.2 protein4883e-047
Q3ED83 Uncharacterized protein At1g21150.14677e-045
A5BC27 Putative uncharacterized protein3172e-027
A5BC28 Putative uncharacterized protein3073e-026
A5AEZ3 Putative uncharacterized protein3002e-025

Arabidopsis top hits (Blast detail)Scoree value
AT1G21150.1 mitochondrial transcription termination factor family protein / mTERF family protein4674e-047
AT5G07900.1 mitochondrial transcription termination factor family protein / mTERF family protein2892e-026
AT1G61980.1 mitochondrial transcription termination factor-related / mTERF-related2417e-021
AT1G61970.1 mitochondrial transcription termination factor-related / mTERF-related2391e-020
AT1G62120.1 mitochondrial transcription termination factor-related / mTERF-related2345e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members