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Information for unigene UN79980

FASTA Sequence
Unigene ID: UN79980Length: 739 SSR 
AACAGCAAAATAAAATAAAAAGAAAAAAGCACAAAGACATAACTAACTGCAAAGCTGTCTAAATCCCATTAAGACTACACAATCAA
AAGCCTTTTGGTTCTTCTTCTTCTTCTCCTCCTCACAACTGTGAAAACTTTATCCTCTTTCACAGTCCCTACTGTTATTATCACCT
TCGTTCAAGCTCTCATCTTCTTGCTGGTACCGCAAGTCGGACACTTGTAGTGTTTGATGTGCTCAGCCTTGGCGGGTGTGATCTTC
ACGCATTTTCCATGGAACCATTTCTCACAAGCATCACAACATATCCAGAAGTCATCATAGTTCTCTCCACACGCACCACAAACCGC
ACCTTGTCCATCATCTTCCTCGTCTTCTCCGCTCTCATCATCTTCTCTTGGTGGTGGAGACATCTTTGAAGCCTTGGTGTGAGACT
CAGATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGGTTAGCAGATAGGTCCTTGGATTGCTTTGCATTG
CCAGTTATGACCTCGAAAAGGGTTGGCAGATCATTTATCATCTGGAAGAGCCTCTTCCTCTCGTTTTTACCAAACCCGAAACGAGC
ACCGAAGTAAAAGGCAACAGAGATGAGCCATGAGTCGCTGTGGACAGCAACCAAAGTAATCCAGTCTTTTTCAGGCATCCCGTTCC
TTGCAAAGTTGATGCCTAAAGCTGGTTCAGAAGCTCGGGGAGGGACCTCAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAF43952 Contains similarity to an Alfalfa nucleic acid binding protein from Medicago sativa gb|L07291.1 and contains a PHD-finger PF|00628 domain. ESTs gb|AI995787, gb|AA721930, gb|T42258 come from this gene [Arabidopsis thaliana]8844e-093
NP_172903 protein alfin-like 7 [Arabidopsis thaliana]8844e-093
XP_002892811 PHD finger family protein [Arabidopsis lyrata subsp. lyrata]8773e-092
AAM65374 putative PHD-type zinc finger protein [Arabidopsis thaliana]8048e-084
NP_178351 protein alfin-like 6 [Arabidopsis thaliana]8002e-083

Swiss-Prot top hits (Blast detail)Scoree value
O81488 PHD finger protein At5g262106225e-064
Q9W0T1 Nucleosome-remodeling factor subunit NURF3011476e-009
Q8C9B9 Death-inducer obliterator 11306e-007
Q9CWW7 CpG-binding protein1234e-006

TrEMBL top hits (Blast detail)Scoree value
Q8LA16 At1g145108843e-093
Q9M9R2 F14L17.29 protein8843e-093
Q8LAH0 Putative PHD-type zinc finger protein8046e-084
Q8S8M9 Putative PHD-type zinc finger protein8002e-083
Q06A75 PHD57652e-079

Arabidopsis top hits (Blast detail)Scoree value
AT1G14510.1 AL7 (ALFIN-LIKE 7); DNA binding / methylated histone residue binding8851e-095
AT2G02470.1 AL6 (ALFIN-LIKE 6); DNA binding / methylated histone residue binding8001e-085
AT3G42790.1 AL3 (ALFIN-LIKE 3); DNA binding / methylated histone residue binding6252e-065
AT5G26210.1 AL4 (ALFIN-LIKE 4); DNA binding / methylated histone residue binding6234e-065
AT5G20510.1 AL5 (ALFIN-LIKE 5); DNA binding / methylated histone residue binding6063e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members