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Information for unigene UN80028
| FASTA Sequence |
| Unigene ID: UN80028 | Length: 373 |
SSR | | GGGGAAGAGTAATAAGATTGTCTAAAAAGTGCACAAATGCATGAACAAAAAAAAAAAGAGGAAAGTAACCCTTATAAACCCTAAAG
TTCCTCAAGACTCAACTTTAGAACTTGTAAACTCTTTCAAAACGCTAAAACAAGCCGAGTCTCTAAAAACTGCAAGGAGCAAATAA
GTTTTGTTCTTAGTTCTTCTTGCTCTTTGATTTCCCAGACAATGTCTTGGCCAAATGAGTTCCCTCGAGCCACTCGTCCATTAATG
CGTCGGTAGACCTGGTTCCTACTTCCACCTTGGACACCTTTTTGGTTTTCTTAGTGAGACGCTGCACTTGGCTGTATGCCCATAGA
CCGAGGAGGAGGAGGAGAGCAATCCCAAG
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002878536 hypothetical protein ARALYDRAFT_480966 [Arabidopsis lyrata subsp. lyrata] | 287 | 2e-024 |
| AAM63845 putative signal sequence receptor, alpha subunit (SSR-alpha) [Arabidopsis thaliana] | 278 | 2e-023 |
| NP_565498 translocon-associated protein subunit alpha [Arabidopsis thaliana] | 274 | 6e-023 |
| AAA21820 alpha-subunit; putative [Arabidopsis thaliana] | 274 | 6e-023 |
| ACJ85475 unknown [Medicago truncatula] | 211 | 1e-015 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P45434 Translocon-associated protein subunit alpha | 274 | 2e-024 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q8LC49 Putative signal sequence receptor, alpha subunit (SSR-alpha) | 278 | 1e-023 |
| Q5M727 At2g21160 | 274 | 4e-023 |
| B7FL41 Putative uncharacterized protein | 211 | 8e-016 |
| C6T7K0 Putative uncharacterized protein | 210 | 1e-015 |
| B7FIS2 Putative uncharacterized protein | 206 | 3e-015 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT2G21160.1 translocon-associated protein alpha (TRAP alpha) family protein | 275 | 2e-025 |
| AT2G16595.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: translocon-associated protein alpha (TRAP alpha) family protein (TAIR:AT2G21160.1); Has 191 Blast hits to 191 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 121; Fungi - 18; Plants - 38; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | 131 | 1e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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