 |
Information for unigene UN80309
| FASTA Sequence |
| Unigene ID: UN80309 | Length: 571 |
SSR | | GGATCCACCCTCTCCTTCCTTCCTTCCTTCCTTCAACGATAAGACATAGAGGCGGAAGATCTCCGACTCCGGTTAACGGAACGATT
TCAACTTTTGTTTTCCTTATTTTTGATTGGATTCAGATCCATTAAGTCTTGTCTCAAGGCTCGATTCCTTCCTTCTTTCTCCAACT
GGAAAGACTGACAATGGCTGGCACTAAGGGATCAGAGAGTGTTAGGAGTTTGATGTACCCAGGGAAAAGTGCTTTGCTCCCTCCAA
AGATCCCCTTTCCTAGCGTATCAGCATCCTATTCTGACTACGTTCCCTGTGGTTCAAGGCAAGGTCAGAAGGTTAGTATTGAGAAA
GCTCACCACCACCAGCGGACTTCCTCTGAGAGCCATTTGGTGGAAGAGCTTCCTTTTTGGCTTGATGATCTTCTCAACGAGCCTGA
GACCCCTGCTTCTCGCAAATCTGGTGCCATCTGGGCCTCCTCTTCCTTCCTGGCTACCTTCCACTGGAGCATCGTATATGTCTCAA
GATGCAACAGCAGAGTATGCAGAAGCTCTTTCTCATGACACAAAGAGGTTCTCTT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002888232 predicted protein [Arabidopsis lyrata subsp. lyrata] | 361 | 1e-032 |
| NP_176108 basic helix-loop-helix domain-containing protein [Arabidopsis thaliana] | 349 | 3e-031 |
| AAG50695 bZIP transcriptional activator RSG, putative [Arabidopsis thaliana] | 349 | 3e-031 |
| AAO42021 putative bZIP family transcription factor [Arabidopsis thaliana] | 349 | 3e-031 |
| BAJ34015 unnamed protein product [Thellungiella halophila] | 328 | 7e-029 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8W3M7 Uncharacterized membrane protein At4g06598 | 228 | 1e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q84WC8 At1g58110 | 349 | 2e-031 |
| Q9C537 BZIP transcriptional activator RSG, putative | 349 | 2e-031 |
| B9T452 Transcription factor RF2a, putative | 283 | 8e-024 |
| A9PHN3 Putative uncharacterized protein | 268 | 5e-022 |
| B9GZ55 Predicted protein | 268 | 5e-022 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G58110.1 bZIP family transcription factor | 349 | 1e-033 |
| AT1G58110.2 bZIP family transcription factor | 349 | 1e-033 |
| AT4G06598.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: bZIP family transcription factor (TAIR:AT1G58110.2). | 224 | 4e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
